Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1598 ATGTTCGGCTTAAAGAAATCTCCCTTAAAAGTTGTTAAACCTAGTTCTGGTGATCCTGTCTATCCTGTTAAATCAGGATCAAACCCATTTGATTCTGATGATGAGACGAAGGAAAACCGGAAGTATGATTCCCCAAAAAAAGTTAACACCAACccttttgatgatgatgatgacgacaGAGAAAAGAactcttcatcatcttcttctcatGCCCTTCAATCTGTAAACCGAAACAAGTACAGGAATGATTTCCGTGACTCGGGAGGAATAGAAAATCAATCAGTACAAGAATTGGAGGATTATTCTGTTTACAAGGCTGAAGAGACTACAAAATCAGTCAAAAGTTGTTTGAAGATAGCAGAAGACATAAGAGAGGATGCTACCAAGACTTTAGTCACCCTACACCAACAGGGTGAGCAAATCACCAGGTCTCACAATGTCGCTGTTGACATCGATCAAGATCTTAGTCGgGGAGAAAAGCTTTTGGGAAGTCTTGGTGGTCTCTTCTCCAAAACTTGGAAACCTAAGAAGACACGCTCAATTACAGGCCCTATTATTCTTGGAGATGATCATGTCAGAACAAAGGGCAACCATTTGGAGCAGAGAGAGAAGTTGGGATTGACTTCTGCACCCAGAGGGCATTCAAAAGCCCGGATGCCACCTCTAGAGCCAACAAATGCACTTGAAAAAGTTGAGATTGAGAAGGGGAAACAAGATGATGCACTGTCAGATCTAAGTGATCTCTTGGGAGAGCTGAAAGATATGGCTGTTGACATGGGATCTGAAATTGAGAGGCACAACAAAGCTCTGGACCATCTATACACCGACGTCGACGAGTTGAATTTCCGAGTGAAAGGTGCGAATCAACGAGGTCGTCGTTTACTGGGAAAGTAG 894 0.406 MFGLKKSPLKVVKPSSGDPVYPVKSGSNPFDSDDETKENRKYDSPKKVNTNPFDDDDDDREKNSSSSSSHALQSVNRNKYRNDFRDSGGIENQSVQELEDYSVYKAEETTKSVKSCLKIAEDIREDATKTLVTLHQQGEQITRSHNVAVDIDQDLSRGEKLLGSLGGLFSKTWKPKKTRSITGPIILGDDHVRTKGNHLEQREKLGLTSAPRGHSKARMPPLEPTNALEKVEIEKGKQDDALSDLSDLLGELKDMAVDMGSEIERHNKALDHLYTDVDELNFRVKGANQRGRRLLGK 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1598 297 MobiDBLite consensus disorder prediction 1 88 - -
Sto3g1598 297 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 1 297 - -
Sto3g1598 297 SUPERFAMILY SNARE fusion complex 93 163 - -
Sto3g1598 297 Gene3D - 89 166 - -
Sto3g1598 297 Gene3D - 230 296 - -
Sto3g1598 297 SMART tSNARE_6 227 294 IPR000727 -
Sto3g1598 297 SMART tSNARE_6 98 165 IPR000727 -
Sto3g1598 297 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 232 294 IPR000727 -
Sto3g1598 297 PANTHER SYNAPTOSOMAL ASSOCIATED PROTEIN 1 297 - -
Sto3g1598 297 MobiDBLite consensus disorder prediction 30 65 - -
Sto3g1598 297 CDD SNARE_Qc 237 293 - -
Sto3g1598 297 CDD SNARE_SNAP25N_23N_29N_SEC9N 100 164 IPR044766 GO:0005484|GO:0031201
Sto3g1598 297 SUPERFAMILY SNARE fusion complex 235 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1598 Sto-Chr3 11909182 11911843 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1598 K18211 - gmx:100809874 426.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1598 3 11909182 11911843 Sto3g1598 3 11909182 11911843 ECH