Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1579 ATGGGTCTGACGACGGACGATCGATCGGAAATAGTGTTCTTCGACGTCGAGACCACCATCCCGACCCGATCCGGTCAGAACTATGCCATTTTGGAGTTCGGAGCCATCTTGGTTTGCCCCAAGAAGCTAACGGAGCTCCATAGTTACTCCACCTTGGTCCGACCCGCCGATCCTTCTCTCATCTCTCCCTTGTCCGAACGCTGCAACGGCATTAGCCGCCACGCTGTTGCGTCGGCTCCTTCTTTCACCGAAATCGCCGATGCGGTTTATGACCTTCTACACGGCCGGATTTGGGCGGGTCACAATATTTTAAGGTTTGACTGTGTTCGGATCAGAGATGCATTTGCTGAGATTAATCGGCCAGCACCAGAACCAAAGGGTACTATTGACTCACTAGTTATTTTAACTCAAAGGTTTGGAAGGAGAGCTGGTGACATGAAGATGGCTACTCTTGCAACATATTTTGGGCTTGGACGGCAGACACATAGGAGCTTAGATGATGTTCGGATGAATTTTGAAGTCCTCAAGTACTGTGCAACAGTTCTATTCTTAGAATCAAGTCTGCCAGAAGTATTCACAGCAGATTCTTGTATTTCTCCAAATGCTACCACACAAAGTCGTAGTAATAGAAAATCTTCCCCAGACTCATCAGATATGAAAATGGATTCTGTGTCTTTGTCATCTcctgaaaatcaaattaaagaggAAAATCAGTCTCTACTTCCTCGTACAACGTGCAGCTCAAAAGAGGCTATATCAAACATGGCCAATCCTGATGAAGTTCAGCCAGATCCTTTTGACTTGCGTTCTCTTAGTGATGACCTgaaaagagaatccaaagaaatACCCATGCAAGAGTCAGATAAGATGTCTTCCTCAGCTGCTGTGTCTGAAGTTTGCAGCAGTTCTATTGTTGTTTTCGAGCCTGATGAAATATGTATCCCCTCTATCAGTGCGTCTCTTGTTCCATTTTATCGTGGCAGTCAAAGGATAGAATTATTGCATAAAGGTGTTCCCTTTCTGCTTTCTTGTACTAGTGTGAAAGCACGGTTTGGAATTAGTCCAAAGTTTCGTGATCAAGCTGGCCGGCCACGGTTGAGTTTTGTGGTTGAGCCATCGCTAAATTTATGTAAGGTTCTTGATGCATGCGAAAGTATTGCGCAAAGATTATTGTTGGATTCTGGTAGCAGCTCTGATTGGAGGTCAGTTGTTATGAGAAAAGATGGCTTCTTCGACCAACCTACTCTGAGATTGCATATACCAACAGCAGTACGCGAGGACATGATCATATATGCAACAGAGATATACCAAAGTGAATCATCTGGCACTGTGCAAAGAATTCTTTCCAGTAAGTTTGATGACGCAGAACTTAGTTCCTTGATCATTCCTGGGACATTTGTTGATGCATTCATTTCCTTAGATCCATATGACTATCATCAGAATGCAGGAATTAAATTAGTTACCAAAAAGTTGATAATTCACAACAAGCAGAAGGAAGATTAG 1503 0.4265 MGLTTDDRSEIVFFDVETTIPTRSGQNYAILEFGAILVCPKKLTELHSYSTLVRPADPSLISPLSERCNGISRHAVASAPSFTEIADAVYDLLHGRIWAGHNILRFDCVRIRDAFAEINRPAPEPKGTIDSLVILTQRFGRRAGDMKMATLATYFGLGRQTHRSLDDVRMNFEVLKYCATVLFLESSLPEVFTADSCISPNATTQSRSNRKSSPDSSDMKMDSVSLSSPENQIKEENQSLLPRTTCSSKEAISNMANPDEVQPDPFDLRSLSDDLKRESKEIPMQESDKMSSSAAVSEVCSSSIVVFEPDEICIPSISASLVPFYRGSQRIELLHKGVPFLLSCTSVKARFGISPKFRDQAGRPRLSFVVEPSLNLCKVLDACESIAQRLLLDSGSSSDWRSVVMRKDGFFDQPTLRLHIPTAVREDMIIYATEIYQSESSGTVQRILSSKFDDAELSSLIIPGTFVDAFISLDPYDYHQNAGIKLVTKKLIIHNKQKED 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1579 500 MobiDBLite consensus disorder prediction 199 241 - -
Sto3g1579 500 SMART exoiiiendus 10 184 IPR013520 -
Sto3g1579 500 PANTHER DNA POLYMERASE III SUBUNIT EPSILON 3 496 - -
Sto3g1579 500 CDD DEDDh 12 176 - -
Sto3g1579 500 PANTHER PROTEIN NEN3 3 496 - -
Sto3g1579 500 SUPERFAMILY Ribonuclease H-like 9 180 IPR012337 -
Sto3g1579 500 Pfam Exonuclease 12 174 IPR013520 -
Sto3g1579 500 Gene3D - 4 181 IPR036397 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1579 Sto-Chr3 11718879 11723759 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1579 - - ccaj:109808157 676.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1579 3 11718879 11723759 Sto3g1579 3 11718879 11723759 ECH