Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1558 ATGAAGCTGAATCATATGAGGAGGCTAGTTTTGGTACTAGTGATGAccattttagggttttggattgagGGATGCCATTGCAAGATTGTGCAGTTCATATTTGGTGACTCCCTCTCTGATGTTGGAAACAACAGGTACCTTTCAAGAAGCCTTGCTCAGGCAAGCCTCCCTTGGTATGGTATTGATTTTGGGAATGGTTTGCCTAATGGTAGATTCTCTAATGGCCGTACTGTTGCTGATATTATAGGTGACAATATGGGCCTTCCGAGGCCACCAGCATTCTTGGACCCATCTTTAAGTGAAGATGTCATACTGGAAAATGGAGTGAATTATGCTTCTGGGGGTGGTGGCATCTTGAATGAAACTGGAAGCTATTTTATTCAGAGGTTTTCACTCTACAAACAAATCGAGCTGTTTCAGGGGACTCAAGAACTAATCAGAAACAAAATTGGAAAAGAGGCAGCAGATGAATTTTTCCAGGGAGCTCGCTATGTGGTTGCTTTAGGAAGCAATGACTTCATCAATAACTACTTGATGCCTGTTTATAGTGATTCATGGACATACAATGATGACACTTTTGTACAATACTTGACTGGCACACTACAAGACCAATTAAAGCTACTGCATAAGTTAGGAGCAAGGCAATTGATGGTGTTTGGGTTGGGACCTATGGGCTGCATTCCCCTTCAAAGGGTGCTTAGTACATCTGGGAATTGTCAAGAAAAAGCAAACAAGCTAGCTCTAAGCTTTAATAAAGCTTCAAGCAAGTTAGTAGATGACTTGGCCACCCAGCTTCCTAATTCAAGCTATAAATTTGGAGATGCCTATGATGTTGTTGATGATGTTATTAGCAATCCATCCAAATACGGATTCGAAAATTCGGATTCGCCGTGCTGCTCCTTCGGGAATATCCGGCCTGCTTTGACATGTATACCGGCATCAAGGCTGTGCAAAGATAGAAGCAAGTATGTGTTTTGGGATGAGTACCACCCCTCAGACAGTGCTAATGAGCTGATTGCCAATGAGCTCATCAAGAAATTCGGGTTTGTACGTGTCGATCAAACGAATGCTCCTTCGCCTGCACCGGCTCTGGCTCCGGCTCCTTCTCCAGAAGATTAA 1119 0.4245 MKLNHMRRLVLVLVMTILGFWIEGCHCKIVQFIFGDSLSDVGNNRYLSRSLAQASLPWYGIDFGNGLPNGRFSNGRTVADIIGDNMGLPRPPAFLDPSLSEDVILENGVNYASGGGGILNETGSYFIQRFSLYKQIELFQGTQELIRNKIGKEAADEFFQGARYVVALGSNDFINNYLMPVYSDSWTYNDDTFVQYLTGTLQDQLKLLHKLGARQLMVFGLGPMGCIPLQRVLSTSGNCQEKANKLALSFNKASSKLVDDLATQLPNSSYKFGDAYDVVDDVISNPSKYGFENSDSPCCSFGNIRPALTCIPASRLCKDRSKYVFWDEYHPSDSANELIANELIKKFGFVRVDQTNAPSPAPALAPAPSPED 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1558 372 SUPERFAMILY SGNH hydrolase 33 354 - -
Sto3g1558 372 Gene3D SGNH hydrolase 30 347 IPR036514 -
Sto3g1558 372 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 9 361 - -
Sto3g1558 372 CDD SGNH_plant_lipase_like 32 346 IPR035669 -
Sto3g1558 372 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 9 361 - -
Sto3g1558 372 Pfam GDSL-like Lipase/Acylhydrolase 32 342 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1558 Sto-Chr3 11539587 11541542 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1558 32 343 Acyl Lipid Metabolism Gene Families AT4G10950 33.439 1.25e-61 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1558 - - gmx:100803991 631.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1558 3 11539587 11541542 Sto3g1558 3 11539587 11541542 ECH