Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1544 ATGGAATCGCCAGGAGAGTGGTTGGAGAAGGCGTTGTTTGATCTGTGCCAAAAGATAGAAACGGGTTTGAGTTTAGGTCTCGATAAGGAGATCATTACCGGCCTCGTTTCCTACTGCGAGCTTGCTGATCCCCGTGATGCTAAGGAGTACCTTGACAATATTATTGGCCAGGAAGCAGGCAAAACTGTGATTGAAGAATACTTGCGACGGAGAAGTCAGTCAGAATTCATCAGCAAGTCAGATGTTCCTACATCAAATTTACATGCCTATGTCAAGCCACGTTCAGTTGATGCATCTGCTAGCGGAACTAAGAAGGCATTGAGAGCACCCAAAGCAGTGACAGTCCCCAGCCATCATGTGGAAACCAAACAAAATGCAGTTGCCAGTAATCAGGAAAATAAGATACCAGCTGTGGGTAGCGACTCGAAGACATCAAATAAAGGAAACCAAGTGAATTCTAAAAAGAAGAAAGCAGGGAAATCTGTTTCACTTGCTGAAGCTGCCAAAGGGTCAATTGTATTTCAGCAGGGAAGACCATGCTCTTGTCAAGCACGTCGTCATAGACTAGTCAGCAATTGTTTATCTTGTGGCAAAATAGTTTGTGAACAGGAAGGAGAGGGACCTTGCAATTTCTGTGGTTCCCTTGTGTTGAGAGAGGGGAGCACATATGCTGGTCTGGAAGAAAGTTTGCCTCCCCTGTCAGATGCTGAAGCTGCTGCTGAAGCTTATGCAAAGAGGCTTGTTGATTATGACCGAAACTCTGCTGCTCGTACAACAGTTATTGATGACCAAAGTGACTACTATGAGATTGATGGAAACAGTTGGTTGTCGAAGGAGGAAAAAGAACtattgaagaagaaacaaaaggaGATGGAAGAAGCTGAACGAGCCAAACGAAATAGAGTTGTTGTGACTTTCGATCTAGTTGGCCGCAAGGTGCTTCTGAATGAAGATGGAGTTTCAGAATTACAGTCTGACAATAGAATATTACGTCCGGTGGACGAAAGGGAAGTGAACCGCATCAAACCAAGTCCAAATCTTAAGATTCAGCCAGTTTTTGTGGACCCAGGATTGAGTAGCAAGTCTGGCAAAGAGAGACAACCAAGCAAAGGCCTGAGTAAGGGTTTATGCTTGGAGATCACAGGGAGGGTGCAGCATGATAGCAATGACTTGAAATACTTGATGATGGAAAGCCAATTGGCCAAGGCTTCAAATGGGAACTCTTGGCAAGTACCTTCTGTAAATGGTGCTCTGCGCGTTGGAGATGATGGAGAGTGTTCACTGGATTATGAGTAA 1296 0.4414 MESPGEWLEKALFDLCQKIETGLSLGLDKEIITGLVSYCELADPRDAKEYLDNIIGQEAGKTVIEEYLRRRSQSEFISKSDVPTSNLHAYVKPRSVDASASGTKKALRAPKAVTVPSHHVETKQNAVASNQENKIPAVGSDSKTSNKGNQVNSKKKKAGKSVSLAEAAKGSIVFQQGRPCSCQARRHRLVSNCLSCGKIVCEQEGEGPCNFCGSLVLREGSTYAGLEESLPPLSDAEAAAEAYAKRLVDYDRNSAARTTVIDDQSDYYEIDGNSWLSKEEKELLKKKQKEMEEAERAKRNRVVVTFDLVGRKVLLNEDGVSELQSDNRILRPVDEREVNRIKPSPNLKIQPVFVDPGLSSKSGKERQPSKGLSKGLCLEITGRVQHDSNDLKYLMMESQLAKASNGNSWQVPSVNGALRVGDDGECSLDYE 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1544 431 PANTHER THYROID RECEPTOR INTERACTING PROTEIN RELATED 3 431 IPR039128 -
Sto3g1544 431 MobiDBLite consensus disorder prediction 100 160 - -
Sto3g1544 431 Pfam Putative zinc finger motif, C2HC5-type 178 218 IPR009349 GO:0005634|GO:0006355|GO:0008270
Sto3g1544 431 PANTHER TRANSCRIPTION REGULATOR/ ZINC ION BINDING PROTEIN 3 431 - -
Sto3g1544 431 Coils Coil 233 253 - -
Sto3g1544 431 Coils Coil 277 301 - -
Sto3g1544 431 MobiDBLite consensus disorder prediction 118 157 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1544 K23398 - gmx:100810833 616.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1544 3 11429737 11432809 Sto3g1544 3 11429737 11432809 ECH