Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1543 ATGGCAACAAAAGGAAACCCAGGAGGAGACAATAGAAATAGGGGTTCAATGTCAGTTTTCATTGTGGTTGGTTTGTGTggttttttctatatattggGTGCTTGGAAACGGAGTGGTTTTGGGAAGGGAGACAGCATAGCCTGGCAGGTTACTAAACAGACAGATTGCAGCATTCtctctaatttaaattatgaaacCCACCATGATTTTGATGGATTGACTGATGACTCTGAAGAAGCACAAGTCAAGGAATTTAAGCCATGCGAAGATCGCTACATTGATTACACTCCCTGTCATGATCAAATGCGAGCGATGACATTCCCTAGAGAGAGTATGATTTATAGAGAAAGGCACTGTCCTCCTGAAGAAGAAAAGCTGCATTGTCTCATACCTGCACCCAGAGGATATGCAACACCATTTCCGTGGCCCAAGAGTCGGGATTATGTACCATATGCAAATGCACCTTATAAGAGTTTGACTGTAGAGAAGGCTGTACAGAATTGGATTCAGTTTGAAGGAAATGTTTTCAGGTTCCCTGGTGGAGGAACGCAGTTTCCCCAAGGAGCTGATGCTTATATTGATGAATTAGCATCTGTTATCCCTTTGGACAACGGGATTGTTAGAACTGCTTTAGATACTGGCTGTGGGGTTGCTAGTTGGGGTGCATACCTGTTTAAAAAGAAGgtcttaactatgtcaattgCACCAAGGGATTCTCATGAAGCGCAAGTCCAATTTGCCTTGGAAAGAGGTGTTCCAGCGATCATTGGCGTTCTCGGAACCGTAAAGCTGCCTTTCCCTGCTGGATCTTTTGACATGGCACATTGTTCTCGCTGTTTAATTCCATGGGGTTCAAATGGTGGAATGTACATGATGGAAGTGGACCGAGTTCTTAGACCTGGTGGTTACTGGATACTTTCTGGTCCTCCTATAAATTGGAAGAATAACTACCAAGCATGGCAGCGACCTGAGTGGGAACTTGAGGAGGAGCAAAGGAAGATTGAAGATATTGCTAAACTTCTCTGCTGGGAAAAGAAACATGAGAAAGGTGAAATTGCTATCTGGAGAAAAAGATTAAACAATGACGAATGCGCTGATCAAGAAACTCAGCCTGCAATATGTGAATCCACAAATGCAGATGATGTCTGGTACAAGAAGATGGAAAAGTGTGTAACTCCTTCTCCTGAAGCTAGTAATTCATGGAAGCCTTTCCCAAAGAGACTTAATGATATCCCTTCTAGAATATCCAGTGGATCCATTCCTGGTGTATCTGTGGAGCTATATGAGAAAGACAACCGATTATGGAAGAAGCACTTGAGTGCTTATAAGCggataaacaaaattattgacTCAGGCAGATATCGCAACATCATGGACATGAATGCTGGTCTAGGAAGTTTTGCCGCTGCCTTGGAATCTCCCAAATTGTGGGTTATGAACGTTATGCCTACAATTGCTGAGAAAGATACCTTAGGTGTTATATATGAGCGTGGATTGATTGGCATTTATCATGACTGGTGTGAAGCCTTCTCTACATATCCAAGGACATATGATCTGATTCATGCAAACGGTGTTTTCAGCTTGTACAAGGATAAGTGTAATCCAGAAGACATCTTATTGGAGATGGACCGTATCTTACGGCCTGAAGGAGCAGTAATAATCCGAGATCAAGTGGATGTGCTAATGCAGCTGAAAAGAATTGTGAGAGGAATGAGATGGAATACCAAGATAGTAGATCATGAGGATGGTCCTCTTGTTtcagataaaatattatttgctgTCAAGAAATATTGGGTTGCAGGTGATAACTTTACAGGCTCACGTTGA 1827 0.4072 MATKGNPGGDNRNRGSMSVFIVVGLCGFFYILGAWKRSGFGKGDSIAWQVTKQTDCSILSNLNYETHHDFDGLTDDSEEAQVKEFKPCEDRYIDYTPCHDQMRAMTFPRESMIYRERHCPPEEEKLHCLIPAPRGYATPFPWPKSRDYVPYANAPYKSLTVEKAVQNWIQFEGNVFRFPGGGTQFPQGADAYIDELASVIPLDNGIVRTALDTGCGVASWGAYLFKKKVLTMSIAPRDSHEAQVQFALERGVPAIIGVLGTVKLPFPAGSFDMAHCSRCLIPWGSNGGMYMMEVDRVLRPGGYWILSGPPINWKNNYQAWQRPEWELEEEQRKIEDIAKLLCWEKKHEKGEIAIWRKRLNNDECADQETQPAICESTNADDVWYKKMEKCVTPSPEASNSWKPFPKRLNDIPSRISSGSIPGVSVELYEKDNRLWKKHLSAYKRINKIIDSGRYRNIMDMNAGLGSFAAALESPKLWVMNVMPTIAEKDTLGVIYERGLIGIYHDWCEAFSTYPRTYDLIHANGVFSLYKDKCNPEDILLEMDRILRPEGAVIIRDQVDVLMQLKRIVRGMRWNTKIVDHEDGPLVSDKILFAVKKYWVAGDNFTGSR 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1543 608 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 94 595 IPR004159 GO:0008168
Sto3g1543 608 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 116 332 IPR029063 -
Sto3g1543 608 Gene3D Vaccinia Virus protein VP39 161 363 IPR029063 -
Sto3g1543 608 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 9 603 IPR004159 GO:0008168
Sto3g1543 608 PANTHER METHYLTRANSFERASE PMT2-RELATED 9 603 - -
Sto3g1543 608 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 439 558 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1543 Sto-Chr3 11423275 11426449 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1543 - - jre:108995455 1090.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1543 3 11423275 11426449 Sto12g0895 12 5575087 5577399 ECH
Sto3g1543 3 11423275 11426449 Sto3g1543 3 11423275 11426449 ECH