Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1522 ATGTCTATAGCATCCTCTGTTTCCTGCATTTTCTTAGgccttcttcttctacttcctCTTTCTAATGCAGTAGACCCTAAGATTGGAATCTACATGCTCAAGAGAGGAGACTTCCAGATCAAATTAACAAACTATGGCGCAACCATTATGTCCTTCGTTGTACCTGACAAACATGGTAATTTGACCGATATTGTGCTCGGCTTCGATTCCATCGACTCCTACAAGAATGATTCGGTGTATTTTGGTGCTCTTGTTGGGCGAGTGGCTAATAGAATCGGAGGAGCTCATTTCAGTATGAATGGCCAAACCTATAAATTGCCTGCTAATGATGGAAATAACACACTCCACGGTGGCTCCAATGGCTTCAGTGATGTTGTATGGACAGTAGCCTCTCACAAGATCGATAGTCATATCACATTTACCTACGCTAGTTCTGATAATGAACAAGGCTTTCCTGGAAAACTTGTGGTATCTGTTTCATACATGTTCTTCCAAACCAACAAATTGATAGTGAAGATGGAAGCCAAGCCCATAGACCATCCCACCCCAGTGAACCTAGCTCAACACTCCTATTGGAACCTAAGGGGCCACAACAGTGGTGACATCCTCTCACACACCATCCAAATTTTCGCCTCGCAGGTCACCCCGGTGAACGCCGAGCTCATCCCGACCGGCGAGCTCAAGCCGGTGGCCGGGACCCCCTATGACTTCCTTGAGGCCAAAGAAATAGGCAGCCACATCCATGAGGTGGGTGATGGCTATGACATCAACTATGACTCAGTCTCTGGGAGGAAGATGGAGTTATGGTCTAACCAAGTTGGAGTCCAGTTTTACACAAGCAATATGCTGAAGGATGTGAAGGGTAAAGGTGGGGCCACCTATCAGAAGCATGGTGGGTTTTGTTTGGAGACTCAGGGATTTCCAGATTCTGTGAATCACCCAAATTTTCCATCACAGATTGTGTATCCTGGGCAGAGATATCAGCACTTGATGGTTTATAGGTTCACTGCTGaatag 1017 0.4503 MSIASSVSCIFLGLLLLLPLSNAVDPKIGIYMLKRGDFQIKLTNYGATIMSFVVPDKHGNLTDIVLGFDSIDSYKNDSVYFGALVGRVANRIGGAHFSMNGQTYKLPANDGNNTLHGGSNGFSDVVWTVASHKIDSHITFTYASSDNEQGFPGKLVVSVSYMFFQTNKLIVKMEAKPIDHPTPVNLAQHSYWNLRGHNSGDILSHTIQIFASQVTPVNAELIPTGELKPVAGTPYDFLEAKEIGSHIHEVGDGYDINYDSVSGRKMELWSNQVGVQFYTSNMLKDVKGKGGATYQKHGGFCLETQGFPDSVNHPNFPSQIVYPGQRYQHLMVYRFTAE 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1522 338 CDD galactose_mutarotase_like 30 335 - -
Sto3g1522 338 Gene3D - 23 337 IPR014718 GO:0030246
Sto3g1522 338 Pfam Aldose 1-epimerase 31 334 IPR008183 GO:0005975|GO:0016853
Sto3g1522 338 PANTHER ALDOSE-1-EPIMERASE 8 338 - -
Sto3g1522 338 PIRSF GALM 21 338 IPR015443 GO:0016853|GO:0019318
Sto3g1522 338 PANTHER ALDOSE 1-EPIMERASE 8 338 - -
Sto3g1522 338 SUPERFAMILY Galactose mutarotase-like 27 335 IPR011013 GO:0003824|GO:0005975|GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1522 Sto-Chr3 11252936 11255028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1522 14 337 Miscellaneous Gene Families AT3G47800 59.531 4.31e-153 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1522 K01785 - pvy:116127644 454.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1522 3 11252936 11255028 Sto3g1522 3 11252936 11255028 ECH