Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1509 ATGACGACGCCGTTTCAGCCTCCCAGCAGCGTCAGAAGAGTGATCGTCCAGGTGGTGGAGGCGCGTGATCTTCTTCCCAAGGATGGGCAGGGTAGCTCCAGCCCTTACGTCATGGCGGAGTTCGACGGCCAGAGGAAGAGGACCACCACCAGGTTCAAGGAGTTGAACCCGGTTTGGAACGAGACTCTCGAGTTCATCGTCTCCGATCCCGACGAGATGGAGTTCCAGGTGATGGAGATCGAGGTGTACAACGACAAGAAGTACGGCAATGGAAGCGGTCGCAAGAATCAGTTTCTCGGGAAGGTGAAGCTCTACGGCACTCACTTCGCCAAGCGAGGGGACGAGACTCTCGTCTTCTTCGCCTTGGAGAGGAAGAGCGTGTTTAGTTGGATTAGAGGAGAAATCGGCCTCAAGATTTATTACTATGACGAGTTCATGAACCAGGATCAAACTCACACGGGGCTTCCGCCTCAGCAGAATCtcacagagcaagatcagaggACGAAGACGAAGACGAAATCGAACACTGAACCACCTGCCGTTAATGTCGAGGTTGAGGAAGAAATCGATTCGGAAGTTCCTGAACCAGTCGAGCATTCTGAAGTTGAAGAGGACTCTCAATCGCCTTTTGAAATTGAAGAATCGGCGCCACCGGTGGTGAATCTAAATCTGAATCTGAATCAGAATCATCTTCGGGATCAAGATCAGGATCAGCCATTGCCGGAAATTCTAGAAACACATTGCATTCCGAAATCGAAGAAAATGAAGGCGGCAAGAgcaggaggaggaggagcagCAGCACGGGAGAGAGCGAGAAATTTGAAAAGATCCAACGGAGATGATAAAAttgatcatcatcatcctccTCCAGTTATGACCGGCAAGCCAGCTGGCAACATCTCAGAGAGGGTTGCTCCGCGTGATGATCTCGTGGAGCCAATGCAGTACCTGTTCGTTAGAGTCTTGAAGGCGCGTGGGATTAACGCTCCCTGCGAGAGTCCCTACGTGAAGATTCGAACCTCCAGACGCTTCGTCAGATCCAAACCTGCGAGTTTCCATCGTCCCAACAAAGGCTCGCCGGAGTGGCACCAGGTCTTCGCCTTGGAGCACAACAATGCAGACACTACTTTGGAGATATCGCTTTGGGATTCTCCAACGGAGAAGTTTCTCGGCGGCGTCTGCTTCGATCTCTCCGACGTGCCGGTGCGAGATCCTCCCAACACTCCTTTAGCCTCACAATGGTACCATCTAGAAGCCGGTGCTCCCGGTCAAAAATCCGTCAAGGTTTCCGGTGATATTCAGCTTTCCGTCTGGATCGGCACACAATCAGACGAAGCATTCCCGGAGGCGTGGAACTCAGACGCGCCGTACGTGGCTCACACGCGACCCAAGGTATACCAATCACCCAAGCTCTGGTATCTCCGTGTGAACATAATCGAAGCTCAAGACCTCAAAGTCGTCGCTTCGAATCTACCTCCATTGACGACGCCGGATATTCGAATAAAGGTCCAGCTAGGTTTTCAATCCGCAAGAACCAGACCAGGGTCCATGAACCAACATAGCCTTTCCTTCCATTGGAACGAAGACCTCATGTTCGTCGCCGGTGAGCCTCTGGAAGATTCTATGGTTCTGGTAGTAGAAAAGTACACCACTCCTAGCAAGGAGCCTACACCGTTAGGGCACACACTCGTCCAATTGAGCTCCATCGAGAGGCGCGTCGACGAGCGGCGAGTGGCATCGAAATGGTTCGCATTGGAAGGCGGTGGGTCCTCCTACCGCGGGCGAGTGCTTCTGCGTCTGTGCCTTGAAGGCGGGTACCACGTGCTGGACGAAGCGGCGCACGTGTGCAGCGACTTCCGGCCGACGGCGAAGCAGCTGTGGACGCCGCCGGTGGGGATTCTAGAGCTAGGCATCGTCGGAGCACGCGGTTTGCTTCCCATGAAAACCAAAGGTACAAAAGGAAAGGGGTCCACGGATGCTTACTGTGTTGCCAAGTACGGAAAGAAGTGGGTCCGGACTCGAACCATCACAGACAACTTTGATCCACGTTGGAACGAGCAGTACACGTGGCAGGTGTTCGACCCCTGCACCGTCATCACCATCGGGGTGTTTGACAACTGGCGAatgtttgctgacgtgtcaGAAGAGAAGCCCGACCTCCGCATTGGCAAGGTACGAATACGGGTCTCTACACTCGAGGCCAACAAGATATACACGAACCCGTACCCTCTGATGGTCTTATCCAGAACCGGGTTGAAAAAAATGGGCGAAATTGAGTTGGCGGTCCGGTTTTCTTGCCCGACACTACTACCCGACACATGCCGCATTTACGGCCAGCCATTGCTTCCTAGAATGCACTATCTCCGCCCCATTGGGGTGGCGCAACAGGAGGCGCTGCGCGGAGCCGCCACGAGGATGGTGGCGCAGTGGTTGGCGCGGTCGGAGCCCCCGTTGGGCAAGGAAGTTGTCCATTACATGCTGGATTCGGACTCAAACAATTGGAGCATGAGGAAAAGCAAGGTCCATTGGTTTCGGATCATTGGGGTAATTGCATGGGCTGTGGGTTTGACAAAATCGCTAGACAACATAAAAGGATGGAGAAACCCACTCACAACAATCTTCTTCCATAGCATGTACATTGTACTTGTTTGGTACCCGGATTTGATCATCCCTACGGGGTTCTTATACATGGTTTTGATTGGTATATGGTGTAAGCGGTTCAAACCCAGGATACCGGGTGGGATGGACACCCGGTTGTCCCAAGCCGAAGCGGTTGACCCGGATGAACTTGATGAAGAATTTGACACAATCCCAAGTTCGAAGCCAGCCGATGTGGTTCGGATGAGGTATGATAGGTTAAGGATGGTGGCAGCTCGGGTTCAGAAAGTGTTGGGTGATGTTGCGACCCAAGGGGAGAGGGTTCAAGCCTTGGTGAGCTGGAGGGACCCAAAGGCCACCAAGTTGTTCATAGGAGTGTGCTTGGGAATGACTTTGATTTTGTTTGTGGTGCCAACGAAAATGGTGGCAGTGGCTCTAGGATTCTACTACCTCCGCCATCCCATGTTTAGAGACCCAATGCCGCCGGCGAGGTTGAACTTTTTCCGGCGACTTCCAAGCCTATCGGATAGACGTGAAAATCTAAATAGTGGGAGTGAAAGGTGGGTGGGAAAAGGGGTGAGACAAAGGAGCGACTATTTAGCATTTGAAAAAGTTGTAGGGATAAAGGAGGGAAAGTGA 3237 0.5147 MTTPFQPPSSVRRVIVQVVEARDLLPKDGQGSSSPYVMAEFDGQRKRTTTRFKELNPVWNETLEFIVSDPDEMEFQVMEIEVYNDKKYGNGSGRKNQFLGKVKLYGTHFAKRGDETLVFFALERKSVFSWIRGEIGLKIYYYDEFMNQDQTHTGLPPQQNLTEQDQRTKTKTKSNTEPPAVNVEVEEEIDSEVPEPVEHSEVEEDSQSPFEIEESAPPVVNLNLNLNQNHLRDQDQDQPLPEILETHCIPKSKKMKAARAGGGGAAARERARNLKRSNGDDKIDHHHPPPVMTGKPAGNISERVAPRDDLVEPMQYLFVRVLKARGINAPCESPYVKIRTSRRFVRSKPASFHRPNKGSPEWHQVFALEHNNADTTLEISLWDSPTEKFLGGVCFDLSDVPVRDPPNTPLASQWYHLEAGAPGQKSVKVSGDIQLSVWIGTQSDEAFPEAWNSDAPYVAHTRPKVYQSPKLWYLRVNIIEAQDLKVVASNLPPLTTPDIRIKVQLGFQSARTRPGSMNQHSLSFHWNEDLMFVAGEPLEDSMVLVVEKYTTPSKEPTPLGHTLVQLSSIERRVDERRVASKWFALEGGGSSYRGRVLLRLCLEGGYHVLDEAAHVCSDFRPTAKQLWTPPVGILELGIVGARGLLPMKTKGTKGKGSTDAYCVAKYGKKWVRTRTITDNFDPRWNEQYTWQVFDPCTVITIGVFDNWRMFADVSEEKPDLRIGKVRIRVSTLEANKIYTNPYPLMVLSRTGLKKMGEIELAVRFSCPTLLPDTCRIYGQPLLPRMHYLRPIGVAQQEALRGAATRMVAQWLARSEPPLGKEVVHYMLDSDSNNWSMRKSKVHWFRIIGVIAWAVGLTKSLDNIKGWRNPLTTIFFHSMYIVLVWYPDLIIPTGFLYMVLIGIWCKRFKPRIPGGMDTRLSQAEAVDPDELDEEFDTIPSSKPADVVRMRYDRLRMVAARVQKVLGDVATQGERVQALVSWRDPKATKLFIGVCLGMTLILFVVPTKMVAVALGFYYLRHPMFRDPMPPARLNFFRRLPSLSDRRENLNSGSERWVGKGVRQRSDYLAFEKVVGIKEGK 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1509 1078 MobiDBLite consensus disorder prediction 276 299 - -
Sto3g1509 1078 ProSiteProfiles C2 domain profile. 452 583 IPR000008 -
Sto3g1509 1078 SMART C2_3c 13 118 IPR000008 -
Sto3g1509 1078 SMART C2_3c 473 578 IPR000008 -
Sto3g1509 1078 SMART C2_3c 633 741 IPR000008 -
Sto3g1509 1078 SMART C2_3c 316 409 IPR000008 -
Sto3g1509 1078 Pfam Plant phosphoribosyltransferase C-terminal 891 1043 IPR013583 -
Sto3g1509 1078 ProSiteProfiles C2 domain profile. 615 742 IPR000008 -
Sto3g1509 1078 CDD C2C_MCTP_PRT_plant 473 621 - -
Sto3g1509 1078 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 10 1043 - -
Sto3g1509 1078 Pfam C2 domain 632 744 IPR000008 -
Sto3g1509 1078 Pfam C2 domain 472 585 IPR000008 -
Sto3g1509 1078 Pfam C2 domain 316 416 IPR000008 -
Sto3g1509 1078 Pfam C2 domain 14 104 IPR000008 -
Sto3g1509 1078 Gene3D C2 domain 629 768 IPR035892 -
Sto3g1509 1078 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 472 623 IPR035892 -
Sto3g1509 1078 MobiDBLite consensus disorder prediction 151 165 - -
Sto3g1509 1078 MobiDBLite consensus disorder prediction 183 199 - -
Sto3g1509 1078 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 632 785 IPR035892 -
Sto3g1509 1078 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 10 143 IPR035892 -
Sto3g1509 1078 CDD C2D_MCTP_PRT_plant 633 761 - -
Sto3g1509 1078 Gene3D C2 domain 459 602 IPR035892 -
Sto3g1509 1078 PANTHER BNAA10G16860D PROTEIN 10 1043 - -
Sto3g1509 1078 MobiDBLite consensus disorder prediction 151 210 - -
Sto3g1509 1078 Gene3D C2 domain 312 456 IPR035892 -
Sto3g1509 1078 Gene3D C2 domain 10 178 IPR035892 -
Sto3g1509 1078 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 316 456 IPR035892 -
Sto3g1509 1078 ProSiteProfiles C2 domain profile. 296 415 IPR000008 -
Sto3g1509 1078 ProSiteProfiles C2 domain profile. 1 119 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1509 Sto-Chr3 11139290 11142636 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1509 2 1043 Lipid Metabolism Gene Families AT1G74720 63.139 0.0 1358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1509 - - gmx:100783882 1432.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1509 3 11139290 11142636 Sto3g1509 3 11139290 11142636 ECH