Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1475 ATGGCAGTTGAAAGACTAGGAGACAGTATAGGAATAAGAGAAGAGCTCATCAAGAAGGCAACTTCTCTTGCCTTCAAAGCTCACAAATCACCAGAAAAGCCATACCTTCTCGAGAAGATTCGATCCTCTGAACTCATCATCACCTTCTCTGGATCATGGACCATCCCCGATTGGTTCTCGGACAACAATTTCGGAGAAACACCCATCAATCTCActctcttcccttccctcaGGAGCATCGGCAACGACGAACCTGCGTTAGTCAACAAAGCCTTTCTTCTCAGATTCGAAACCATCCTGAACAATTCATCCCTCAAATCcgatGTGAATAAGGCTATggcggagaagaagaagatagtgTTCGCAGGTCACTCCTCGGGAGCTCCAATGGCGATTCTGGCATCGTTATGGACATTGGAACACCACCGCAACGCATCGAACCCTCCGTTCTGCGTCACCTTCGGATCTCCCTTAATCGGCAACCACATACTCCCTCACGCGACGAGACGCGAGGATTGGTCTCGCTATTTCGTCCATTTCCTCACGCGATACGACGTCGTCCCGAGGATCTCCCTCTCCCCCCTCTCCTCGCTCCACCACGAAACCCTAGCCGCCATCCTCCACCTCTTCAATCCCAAATCCAAACCCCCCTCCTCGTCCGCGCACGGCCGGATCGGGCTCGCGGAGTTCTACGGCGGCGTGACGAGGAACGCGGCGGCGGTGACGAGCCACCGCGCGTGCAGCCTGATGGGGAGCACGAACCTGCTGCTGGAGACGGTGGCGAGCCTGGTCGTCTTGAGCCCGTACAGGCCGTTCGGGACGTTCGTGTGGTGCACGGGGAACGGgaggatggtggtggtgaggaaTTCGGAGGCGGAGAGCTTGGAGATGCAGAGTGTGGTGTACTTGGAGAAGCTTGAGGATCTTCCTTTGTCTGGGGATTGTAATGCTGATGATAATGCTGCAACCATTGATCAAGCCTTGAATGATCTTGGATTGGGAACAAGAGCGAGACTGTGCATGAGAGCAGCAGGAGAGTtggagaagcagaaatccaGAAACGAAGCCAAAATAGACAAAGCCAAAGCAGAGAGCACAATGAAGGAGCTCGAAGACTACAAAGAAGTGAGCAGAATCCAAGGAGTGGGATACTACGACGCCTTCAAGCTTCAGAAGGAGCCCAGAGACTTCCAAGCCAACGTGAAGCGCCTCGTCCTCGCGGGCGTGTGGGACGAAGTCATAGAAATGCTGAAGAGGCACGAACTCCCCGACGAATTCGAAGGGAAGCAAGAGTGGATCGAGCTCGGGACCCGGTTTCGCCGGCTGGTCGAGCCCTTGGACATAGGCAACTACTATAGGCACCTCAAGAATGAAGACACGGGGCCTTACATGGTGAGGGCTAGGCCCAAGAGGTACAGGTACACGCAGAGATGGCTCGAGCATGCCCGGAGATTGCCGGGTGGGTCTTGCTCGGAGTCCTGCTTCTGGGCTGAGGTGGAGGAGCTCAGTGTGTTTAAGAGTAATAAGGGGTCGTCTTATGATGAAGAGTTGAAGAGGAGGGTTGTGAAGTTGGAAGAGGATGTGAAGAGATGGAGTGAGGAGGAACTGCCGAGGGATGTGTTCTTGGAGGGGTCTAGTTTTACCAAGTGGTGGAAGAAATTGCCTCAAGATTACAAGGCTGGCATTTTGCAGTGCTAA 1698 0.5124 MAVERLGDSIGIREELIKKATSLAFKAHKSPEKPYLLEKIRSSELIITFSGSWTIPDWFSDNNFGETPINLTLFPSLRSIGNDEPALVNKAFLLRFETILNNSSLKSDVNKAMAEKKKIVFAGHSSGAPMAILASLWTLEHHRNASNPPFCVTFGSPLIGNHILPHATRREDWSRYFVHFLTRYDVVPRISLSPLSSLHHETLAAILHLFNPKSKPPSSSAHGRIGLAEFYGGVTRNAAAVTSHRACSLMGSTNLLLETVASLVVLSPYRPFGTFVWCTGNGRMVVVRNSEAESLEMQSVVYLEKLEDLPLSGDCNADDNAATIDQALNDLGLGTRARLCMRAAGELEKQKSRNEAKIDKAKAESTMKELEDYKEVSRIQGVGYYDAFKLQKEPRDFQANVKRLVLAGVWDEVIEMLKRHELPDEFEGKQEWIELGTRFRRLVEPLDIGNYYRHLKNEDTGPYMVRARPKRYRYTQRWLEHARRLPGGSCSESCFWAEVEELSVFKSNKGSSYDEELKRRVVKLEEDVKRWSEEELPRDVFLEGSSFTKWWKKLPQDYKAGILQC 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1475 565 PANTHER PROTEIN EDS1-RELATED 1 292 IPR044214 GO:0006952
Sto3g1475 565 PANTHER PROTEIN EDS1-RELATED 293 560 IPR044214 GO:0006952
Sto3g1475 565 Gene3D alpha/beta hydrolase 18 222 IPR029058 -
Sto3g1475 565 Coils Coil 514 534 - -
Sto3g1475 565 Pfam Enhanced disease susceptibility 1 protein EP domain 368 554 IPR041266 -
Sto3g1475 565 PANTHER ENHANCED DISEASE SUSCEPTIBILITY PROTEIN 1 292 - -
Sto3g1475 565 PANTHER ENHANCED DISEASE SUSCEPTIBILITY PROTEIN 293 560 - -
Sto3g1475 565 SUPERFAMILY alpha/beta-Hydrolases 40 203 IPR029058 -
Sto3g1475 565 CDD Lipase_3 44 200 - -
Sto3g1475 565 Coils Coil 344 373 - -
Sto3g1475 565 Pfam Lipase (class 3) 46 191 IPR002921 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1475 Sto-Chr3 10834957 10838238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1475 74 182 Acyl Lipid Metabolism Gene Families AT5G14930 31.193 1.20e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1475 K18875 - csin:114256224 637.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1475 3 10834957 10838238 Sto3g1475 3 10834957 10838238 ECH