Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1471 ATGGGAATTGCAGAGGAGAAGGTGGTGGCTGTGATCATGGTGGGAGGACCCACTAAAGGTACTAGATTCCGGCCATTGTCATTGAATATACCCAAGCCGCTTTTTCCTTTAGCTGGACAACCAATGGTTCATCATCCAATTTCTGCTTGTAAAAGGATTCCAAACTTGGCTCAGATTTATCTTATTGGTTTCTACGAGGAACGTGATTTTGCATTATACGTATCTTCCATATCAAATGAGCTTAAAGTCCCTGTTAGATACTTGAAGGAAGAGAAGCCTCATGGTTCAGCTGGTGGTCTTTATAACTTCAGAGATCTGATCATGGAGGATAACCCATCACACATTTTCTTGCTGAACTGTGATGTTTGCTGCAGTTTTCCATTGCCAGAAATGCTGGAGGCTCATAAAAGATATGGTGGAATAGGAACAATCCTAGTTGTGAAGGTTTCAGCAGAGACAGCTGACCAGTTTGGAGAATTGGTAGCTGATCCAGTCACCAATGAGCTGTTGCATTATACAGAGAAACCTGAAACTTTTGTAAGTGACCGAATAAattgtggtgtatatatatttacaccaGATGTCTTTAATGCTATCCAGGGTGTTTCTTCTCAGCGGAAAGACAGAGCTAATTTAAAACGTGTCTCCAGCTTTGAAGCAATGCAACCAGACACAAGGAATCTTCCTTCAGATTTTGTAAGATTGGATCAAGATATCCTCTCACCTCTGGCAGGGAAGAAacagttgtatatatatgaaaccaAGGACTTCTGGGAACAAATAAAAACTCCTGGAATGTCCTTAAAATGTTCTTCCTTGTATCTTGCTCAATTCCGTTACACATCCCCAGACATATTGGCAAAGGGAGATGGTACAAAAAATGCTAGCATCGATGGTGATGTTTATATTCATCCATCAGCCAAAATACATCCATCTGCAAAGATTGGCCCCAATGTATCAATATCAGCAAATGCTCGTATTGGAGCTGGTGCAAGGCTTATCAGTTGTATCATCCTTGATGATGTCGAAATTAAGGCAAGTGAAAATGCAGTTGTAATTCATGCAATTGTTGGGTGGAAATCCTCCATTGGAAAATGGGCTCGCGTCCAGGCAAGTTTAGAAATTTTAGTTATAAAGGCTAGCGGAGATTACAATGCAAAACTTGGGGTCACCATACTTGGTGAATCTGTGACTGTAGAAGATGAGGTTGTGGTTGTTAGTAGCATTGTCCTTCCTCACAAGACCCTCAATGTGGGTGTTCAAGATGAGATACTTTTGTAG 1281 0.3989 MGIAEEKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPLAGQPMVHHPISACKRIPNLAQIYLIGFYEERDFALYVSSISNELKVPVRYLKEEKPHGSAGGLYNFRDLIMEDNPSHIFLLNCDVCCSFPLPEMLEAHKRYGGIGTILVVKVSAETADQFGELVADPVTNELLHYTEKPETFVSDRINCGVYIFTPDVFNAIQGVSSQRKDRANLKRVSSFEAMQPDTRNLPSDFVRLDQDILSPLAGKKQLYIYETKDFWEQIKTPGMSLKCSSLYLAQFRYTSPDILAKGDGTKNASIDGDVYIHPSAKIHPSAKIGPNVSISANARIGAGARLISCIILDDVEIKASENAVVIHAIVGWKSSIGKWARVQASLEILVIKASGDYNAKLGVTILGESVTVEDEVVVVSSIVLPHKTLNVGVQDEILL 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1471 426 PANTHER ADP-GLUCOSE PYROPHOSPHORYLASE FAMILY PROTEIN 3 426 - -
Sto3g1471 426 SUPERFAMILY Nucleotide-diphospho-sugar transferases 8 341 IPR029044 -
Sto3g1471 426 CDD M1P_guanylylT_A_like_N 10 274 - -
Sto3g1471 426 Gene3D Hexapeptide repeat proteins 287 421 - -
Sto3g1471 426 Pfam Nucleotidyl transferase 10 214 IPR005835 GO:0009058|GO:0016779
Sto3g1471 426 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 3 426 - -
Sto3g1471 426 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 3 277 IPR029044 -
Sto3g1471 426 SUPERFAMILY Trimeric LpxA-like enzymes 294 415 IPR011004 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1471 Sto-Chr3 10794774 10798980 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1471 K00966 - qsu:112020171 728.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1471 3 10794774 10798980 Sto3g1471 3 10794774 10798980 ECH