LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto3g1463	ATGATGTTTCCTCGCCGCAATTATTTGACTTGCCTTATGCTATGCCTCTTCTTGCTTTTGACCTTCTTCGACCCTTCCGTGTCTCACTCGCAAATCCGCTGGGCTGCCAAGAAAAAACGAATGAGAGAGAAAGTTCGTAAGATGTTTTACCATGCGTATGACAACTACATGACTCATGCATTTCCGCACGATGAGCTAAAGCCTCTAACCAAAACTTATACAAATTCCTTAAGTGAGCTGGGAAATTTGAAGCTCGAACACTTGCCTCAAGACTACAATGGATCAGCCCTTACACTTATTGAATCATTGTCTAGCCTTCTTATTATGGGTAACAACACAGAATTCAAGAGGGCGGTGCTCTGGCTTTCTGAAAATCTAACATTTGATGTTGACGCTCGCATAAATCTTTTTGAGTGCAACATAAGAgttcttgggggacttgtctctGCTCATCTTCTTGCATCTGATTCTTCAAACAATTTGTTTCAAGGAACTTACAAAAATCAGCTGCTAGTTCTGGCTGAAGATTTAGGGAACCGCTTTCTACCAGCATTTAATACACCCACTGGATTGCCATTTGCATGGATCAACTTAAAGTATGGAGTAATGGAGAATGAGACTACAGAAACAAGCACTTCAGGGTGTGGTTCTCTGATTCTTGAAATGGGTGCTTTATCAAAATTGACTGGTGACCTCAGATATGAATCAGTAGCTTTACGTGCTCTGCGTAAGCTATGGAGCATGAGGAGTTCATTAAATTTAGTTGGAACTACACTGGATGTGGCAACTGGGGAATGGATTGAGTTTTCATCAGGAATTGGAGCTGGGGTTGATTCATTCTATGAGTACCTACTTAAAGCCCATATCCTTTTTGGGAGGGAGGACTTTTGGAGAATGTTTCATTCTGCTTATGTTGCTGTGCAGAAATATTTCAGACATGGttcttgGTACCATGAAGCTGATATGAGGACAGGAAAAGCAACTTATTGGCAACTTACAAGCCTTCAAGCATTTTGGCCTGGTCTTCAAGTTCTTATTGGTGATGTTGCAGCTGCTAATTCAACCCACCGCGAGTTCTTCCATTTGTGGGAGAAATTTGGAGTGCTACCGGAGAGGTATTTGCTGGACTATCAGATGCTGCACCCGACAGAAAAATATTATCCATTGCGCCCTGAATTTGCAGAGTCAACATTCTATCTATATCAAGCAACTAAAGATCCATGGTATATTGAAGTGGGTGAATCAATAATTAATTCCCTTAATTCTTACACCAAAGTGGAAGGCGGGTTTGCGAGCATCAGGGATGTGAAAACTATGGAGCTGGAAGATCATCAACATAGCTTTTTCCTTGCTGAAACGTGCAaatatctatatcttttatttGACGATTCATTTTTAAAAGATGGTAATTACATATTTACCACTGAAGGTCACCCTCTTCCAGTACTAAGAGCTTGGCATGAAAAGCTTCCAGAAACTTACATTCCTAGTAATTGGACTTCCATAAAGAGTCAACAAGAAGCTTATAGAATCAGTGCTATGTCAATGCAAGTATGTCCTGCTATGACTCTAAATTCAGGGAAACGTATAGAGAGTGCATGCCATGTCCCAGATGCTCGCAGTGACCACAGGTGTTTCAGTGATGAAGATTGTGGAGTTGACTCCACAGCATGCAGAAGAAGGTCTTGTAGTATGGCTGGTTATTGTGGGCTTTGGCTATTCatatga	1728	0.4028	MMFPRRNYLTCLMLCLFLLLTFFDPSVSHSQIRWAAKKKRMREKVRKMFYHAYDNYMTHAFPHDELKPLTKTYTNSLSELGNLKLEHLPQDYNGSALTLIESLSSLLIMGNNTEFKRAVLWLSENLTFDVDARINLFECNIRVLGGLVSAHLLASDSSNNLFQGTYKNQLLVLAEDLGNRFLPAFNTPTGLPFAWINLKYGVMENETTETSTSGCGSLILEMGALSKLTGDLRYESVALRALRKLWSMRSSLNLVGTTLDVATGEWIEFSSGIGAGVDSFYEYLLKAHILFGREDFWRMFHSAYVAVQKYFRHGSWYHEADMRTGKATYWQLTSLQAFWPGLQVLIGDVAAANSTHREFFHLWEKFGVLPERYLLDYQMLHPTEKYYPLRPEFAESTFYLYQATKDPWYIEVGESIINSLNSYTKVEGGFASIRDVKTMELEDHQHSFFLAETCKYLYLLFDDSFLKDGNYIFTTEGHPLPVLRAWHEKLPETYIPSNWTSIKSQQEAYRISAMSMQVCPAMTLNSGKRIESACHVPDARSDHRCFSDEDCGVDSTACRRRSCSMAGYCGLWLFI	575

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto3g1463	575	Gene3D	-	31	493	IPR012341	GO:0005975
	Sto3g1463	575	PANTHER	ER DEGRADATION-ENHANCING ALPHA-MANNOSIDASE-LIKE PROTEIN 2	18	574	IPR044674	GO:0004571\|GO:1904380\|GO:1904382
	Sto3g1463	575	SUPERFAMILY	Seven-hairpin glycosidases	39	495	IPR036026	GO:0004571\|GO:0005509\|GO:0016020
	Sto3g1463	575	Pfam	Glycosyl hydrolase family 47	48	481	IPR001382	GO:0004571\|GO:0005509\|GO:0016020
	Sto3g1463	575	PANTHER	ALPHA-MANNOSIDASE I MNS5	18	574	-	-
	Sto3g1463	575	PRINTS	Glycosyl hydrolase family 47 signature	48	68	IPR001382	GO:0004571\|GO:0005509\|GO:0016020
	Sto3g1463	575	PRINTS	Glycosyl hydrolase family 47 signature	133	151	IPR001382	GO:0004571\|GO:0005509\|GO:0016020
	Sto3g1463	575	PRINTS	Glycosyl hydrolase family 47 signature	183	202	IPR001382	GO:0004571\|GO:0005509\|GO:0016020
	Sto3g1463	575	PRINTS	Glycosyl hydrolase family 47 signature	274	291	IPR001382	GO:0004571\|GO:0005509\|GO:0016020
	Sto3g1463	575	PRINTS	Glycosyl hydrolase family 47 signature	331	347	IPR001382	GO:0004571\|GO:0005509\|GO:0016020
	Sto3g1463	575	PRINTS	Glycosyl hydrolase family 47 signature	388	412	IPR001382	GO:0004571\|GO:0005509\|GO:0016020
	Sto3g1463	575	PRINTS	Glycosyl hydrolase family 47 signature	447	467	IPR001382	GO:0004571\|GO:0005509\|GO:0016020

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto3g1463	Sto-Chr3	10711319	10716393	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto3g1463	2	572	Glycoside Hydrolase	AT1G27520	75.521	0.0	918

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto3g1463	K10084		-	gmx:100793674	998.038

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Sto3g1463	3	10711319	10716393	Sto3g1463	3	10711319	10716393	ECH