Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1438 ATGCGATCACGTCGCTTCACTCTCTTCTCCGTTTTACTCATTTCCACCATTTCCCTTCTTCAGGGACACGCATCAGCTGATCTCAACATCAGATCATCATCATCGCCGTTCTCAATCGCTCTCGAAACCCTACAGAAGCAATTAGGCTACACCTTCAAGAGCATCGCTCTTCTTCGCCGTGCCATGACTCATGCTTCCTTCTCGGAAGAGAACAGCAGAGCGTTGAGCATCCTCGGCGCCAATGTCATTGACGCAGCCGTCTCCTTCCAGTCACTTGCGAAGGACATTGACATCTCTTCGAAAGATCTGAACCGTCGAATATCGGAAATCTCCGCCGTGGAATCTTCCTGTACTGTGGACGGATTGCGGTTGGGTTTGCAGAAGGTGGTTCGGGTTTCACCAAAGACTAATTCCTCTGCACCTGCTGTGGTTTGTGGTGCGTTTCGAGCAATCTTCGGTGCCATTGCTGTTGATACTGCTGATTGCGATGCTGCAGGTGACATTTTCTGGGCCATTCATGGTGCTAAGGTCGGGGCTGCTCTACCACTTTGA 552 0.5072 MRSRRFTLFSVLLISTISLLQGHASADLNIRSSSSPFSIALETLQKQLGYTFKSIALLRRAMTHASFSEENSRALSILGANVIDAAVSFQSLAKDIDISSKDLNRRISEISAVESSCTVDGLRLGLQKVVRVSPKTNSSAPAVVCGAFRAIFGAIAVDTADCDAAGDIFWAIHGAKVGAALPL 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1438 183 Pfam Ribonuclease-III-like 56 159 IPR000999 GO:0004525|GO:0006396
Sto3g1438 183 SUPERFAMILY RNase III domain-like 35 172 IPR036389 GO:0004525|GO:0006396
Sto3g1438 183 SMART riboneu5 56 182 IPR000999 GO:0004525|GO:0006396
Sto3g1438 183 Gene3D Ribonuclease III domain 39 177 IPR036389 GO:0004525|GO:0006396
Sto3g1438 183 ProSiteProfiles Ribonuclease III family domain profile. 41 160 IPR000999 GO:0004525|GO:0006396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1438 - - vvi:100265541 236.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1438 3 10536799 10537551 Sto3g1438 3 10536799 10537551 ECH