Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1435 ATGGATCATAGAGTGAGTTTGAAGGGTGGTAATGGTATAAATGCTTTCTCTGCTCTCACCATTGCTGATAATATTGAAGCTCCTTCTGCTAATCACAAACCTCCCATTCTTCCTGGCTGGTTTTCTGAGTATTCCTCCATATGGCCAGGGCAAGCACACTTTTTGAAGGTTGAAAACATATTGTTCCAAGGCAAATCTGAATACCAAACCATGCTGGTATTTGAGTCATCAACATATGGTAAAGTGTTTGTGTTGGATGGAGAACTCCAACTGACAGAGAAGGATGAATGTTCTTACCAAGAGATGATGACTCATCTCCCTCTTTGCTctatcccaaacccaaaaaagGTGCTGCTTATTGGTGGTGGAGATGGTGGCATCCTCAGAGAAATATCCAGACACTCCTCTGTTGAGCAAATTGACATCTGTGAAATTGACACCATGCTCATTGATGTGTATAAAGAGTACTTCCCAGATGTAGCAGTTGGATACAAGGACTCTCGAGTGAAGCTTCATGTTATAGATGGAAGTGTGTTTCTGGACTCTGTTGAAAGAGGCACCTACGATGCAATAATAGCAGATGCCTTCGACccaataaGAGGAGGTGATGACGAGCTTTTTGAAACAGAATTCTTTGAAAAGGCTTCAAGAGGCCTACGAGCAGGAGGAGTATTGTGCATTCAAGCAGAGAGCATATGGTTTAGCGGGGTGATTGGCTTCTTGCTTTGTTCTACGGAAGGCCCATATGTGGACTTCAGAAATCCAATTAACCCCATTGATCCACACAACTACGGCGTATCAAAGCAACCCTTGAAGTTTTACAACTCTGAGgtTCATTCAGCAGCATTTTGCTTGCCATCGTTTGTGAAAAAGGTGAAGAGTAAGAGGTGCATGAAGGGTAGTACTGAAAATGGATGGAGTTGA 924 0.4167 MDHRVSLKGGNGINAFSALTIADNIEAPSANHKPPILPGWFSEYSSIWPGQAHFLKVENILFQGKSEYQTMLVFESSTYGKVFVLDGELQLTEKDECSYQEMMTHLPLCSIPNPKKVLLIGGGDGGILREISRHSSVEQIDICEIDTMLIDVYKEYFPDVAVGYKDSRVKLHVIDGSVFLDSVERGTYDAIIADAFDPIRGGDDELFETEFFEKASRGLRAGGVLCIQAESIWFSGVIGFLLCSTEGPYVDFRNPINPIDPHNYGVSKQPLKFYNSEVHSAAFCLPSFVKKVKSKRCMKGSTENGWS 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1435 307 Hamap Polyamine aminopropyltransferase [speE]. 39 294 IPR001045 GO:0003824
Sto3g1435 307 PANTHER SPERMIDINE/SPERMINE SYNTHASE 33 235 IPR001045 GO:0003824
Sto3g1435 307 PANTHER SPERMIDINE/SPERMINE SYNTHASE 235 294 IPR001045 GO:0003824
Sto3g1435 307 Pfam Spermine/spermidine synthase domain 96 235 - -
Sto3g1435 307 Gene3D Spermidine synthase, tetramerisation domain 22 92 IPR037163 -
Sto3g1435 307 ProSiteProfiles Polyamine biosynthesis (PABS) domain profile. 38 286 IPR030374 -
Sto3g1435 307 ProSitePatterns Polyamine biosynthesis (PABS) domain signature. 117 130 IPR030373 -
Sto3g1435 307 Pfam Spermidine synthase tetramerisation domain 39 93 IPR035246 -
Sto3g1435 307 Gene3D Vaccinia Virus protein VP39 93 296 IPR029063 -
Sto3g1435 307 CDD AdoMet_MTases 138 228 - -
Sto3g1435 307 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 36 292 IPR029063 -
Sto3g1435 307 PANTHER SPERMIDINE SYNTHASE 235 294 - -
Sto3g1435 307 PANTHER SPERMIDINE SYNTHASE 33 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1435 Sto-Chr3 10510023 10513479 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1435 K00797 - gmx:100785862 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1435 3 10510023 10513479 Sto3g1435 3 10510023 10513479 ECH