Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1429 ATGAAGCCAAAATCTTCATCAACTCCATCATGGACCGAGTCAAAGTTAAGCCAGCCCCATCATCATCAACTTGGGTTTCATCAGGACTCAAGGAAGTCATCATCAACTCATCAGTTACAGTTACAGACACACAGAAGTTCTGAGTCCCATGGCTATCATCAGGACCCAATTAGGAAACCATCGACGACGACGGCTCAGTTACATACACAGTTGAGTCAGCTTCATGGGAATCAGCTGCAAGTAGGGGTTCGGGAGCCAAGGCCAAATGACACGCCCGAGTCCCGCTATCAAACCGCCGAAAACACACCCAACTTGCAGCCCCATAACTCTGATcatcagcagcagcagcagcatcgTCAGCATCAGCAGCAGCATCGTCAGCTTCAGCAATATTATCAGCAGCAAGTGAGTGTGCCTGCGGATGCAACGGCGTCGTTGAAGAGGGATAATCAGAAGGTGAGGGCTTTGGAGCTTGGGTTTAGGTTGAGTGAGATGGTGCTGTGTCTAGTTTCGTTTTCGGTCATGGCTACTGACAAGACCCAAGGTTGGAGTGGCGACTCCTTTGATCGCTACAAGGAATATAGGTATTGTGTAAGTGTGAATGTGATAGGGTTCGTATACTCAGGATTTCAAGCATGTGATATGGCGTATAGATTGATAATGGCTTATGTGCTGATATCAGCGTCATCAAGTGCAGCAACAAGAGTGATTGATTGGGAATCGAATTGGGGAAGAGATGAGTTCACAGAGAAGGCAAGTGCATCCATAGCAATGGCGTTTCTGGCTTTTATTTCCTTTGCATTTAGCTCCCTCTTTTCTCTCTTCAACCTTCCTACCTTTTCCCACCattaa 852 0.4542 MKPKSSSTPSWTESKLSQPHHHQLGFHQDSRKSSSTHQLQLQTHRSSESHGYHQDPIRKPSTTTAQLHTQLSQLHGNQLQVGVREPRPNDTPESRYQTAENTPNLQPHNSDHQQQQQHRQHQQQHRQLQQYYQQQVSVPADATASLKRDNQKVRALELGFRLSEMVLCLVSFSVMATDKTQGWSGDSFDRYKEYRYCVSVNVIGFVYSGFQACDMAYRLIMAYVLISASSSAATRVIDWESNWGRDEFTEKASASIAMAFLAFISFAFSSLFSLFNLPTFSHH 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1429 283 MobiDBLite consensus disorder prediction 29 47 - -
Sto3g1429 283 MobiDBLite consensus disorder prediction 1 131 - -
Sto3g1429 283 MobiDBLite consensus disorder prediction 1 19 - -
Sto3g1429 283 MobiDBLite consensus disorder prediction 56 79 - -
Sto3g1429 283 MobiDBLite consensus disorder prediction 92 131 - -
Sto3g1429 283 PANTHER CASP-LIKE PROTEIN 4A3 101 221 - -
Sto3g1429 283 PANTHER CASP-LIKE PROTEIN 4A3 220 279 - -
Sto3g1429 283 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 101 221 - -
Sto3g1429 283 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 220 279 - -
Sto3g1429 283 Pfam Casparian strip membrane protein domain 151 220 IPR006702 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1429 Sto-Chr3 10429266 10430500 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1429 - - csin:114262692 165.236
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1429 3 10429266 10430500 Sto12g0801 12 5058371 5060720 CCT
Sto3g1429 3 10429266 10430500 Sto12g0801 12 5058371 5060720 ECH
Sto3g1429 3 10429266 10430500 Sto3g1429 3 10429266 10430500 ECH