Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1406 ATGATCAACGGGGAGGGGACTCGCGAGGCCGCCTCTCCCGATCCGTTCGATTCGTTCCCTACCTTGCGGGTTCGGCAATCGGACCCTAGTGATGCTTCTCATCCGTCATCGCGCTACTCGTCGTGCGGAGAGTCCGAGTTCGACCGCTATTGTAGCGCGAACTCGGTCATGGGCACCCCGAGTATGTGTAGCACGATCACAGTTTTTAACGATTTTTCAGAATTAGAATTTGGGTCCACCAAAAGTTTTGGGATTGGGGGTGAAAATGGCTTGGAGAATTTCAGTTTAGGCGAAAGAGTTGAGATGACTCCTAAGGATCAAAGGCTTTCGACTTCTAGTGTGTCAGACAGTATGAGAGATTTCAGAATTGGGTTTGGAAGTGAGAATATCAGAAACCAGAAGAATTTAAAATATGGCTTCAGTGGATTGGAACTATACGGGGATGATAATGACGAGCTTACTATGACTATGCTAGATGCATCGAGTTTAATGGCAGTCAACCAATCAGATGAGAAATTGGAGGGTGATAAAGGCTCGGAGAATTTCAGTTTAAGTGAAAGAGTTGAAATGAATCAAAAGGATCAGAGGCTTTTGACTTCTAGTGTTTCAGAAGGTATGAGGGATTTCAGAACTGGGTTTGGCAGTGAGCATATCAGAAACCGGCAGAATTTAAAATATGGCTCCAGTGGGTTGGAATTATATGGTGACGATAATGGAGAGCTTACTATGACTATGGCAGATTCATCAAGTTTAATGGGGGTTAACCAATCATACGAGTATTTGGATCAGGGTGGCAAAGATGTTGTAGAATGTTCTGAAGTGTTAAAAGGACACGATGAATTAGGAGGAGCTGATGATTACTCTGAAACTATGTCTAGTGATGCGGGTGATAATGCAGGACATATTGAGACATATTTGTTAAGCAATGTGGATGAAAAATGTTCTCAATCTAAAATAACAGTTGAAGGTGGTTTATCTTCTACTGTTGATAAAGAGGATGAATTTGACAGTTTTGATGCTCAACCAAATTTGCAAATTGATGAAAGGGAGCTAGAAAACGAAGAAGATGGGAACTCATCCTTTTGTGAAGATTCAGAGGGTGAGGATTCAATGCACAACTATGGCAGTGATGATGACAAAAAGAAGGACTTCTGTCTATCAAGAAGTATACATCATCATCAGGAGTCAAAAGTACAACACGAGAATCCCCTACTTATAAACTCTTCCGTAGCCTTTGGTTCAGACGACCTGGATGATTTCTTGCTAGAAAATGAGGAAAATGGTCAAGTTTCCCTGATGTTTGATTTATTTCAGAGTCAGAAACAAAGGAGTCCTGAAACTGAGAAAAAACCAAGAAATTTGGGTTCTGTGAGCTCAAGAGTTATTTCGACTTCTGGCCAAAAAGTGGAAGGGGAAGATAGGAATGACCAAAAAGATCTCAGTGAACCACAAGTACAAGTGGTCAGGGACTTTCCTGCCGCCTGTTGTCTGGTGCAGGGAGATGATAAGGTTACTAACACAAGAGATAGTTCTTCCAATGCCTCAAGGGATTTTCCAAATATGGTCATATTACATCAGGAAGATGGGAGAGAGATTATTGTTGCAAAAAATAAATGTCCTAAAACTGAAGTTGATTTGGATCCACTAGCAGAAGAGGTTCCTCAAGATATGGATTTGAACGTTTCTAATTCCAATGGTGGAATCACCGAAAAGGCGAATGAGTGCATGAACAAAGAAGCTATCGTCACTAGTGATGTTCAACTTGTCGAAAACCCGGAGTTTGATAAATCTAAGTTCAAGTTTGATCATTCTTCTGATAGCACAGTTGAGCCTGAACTTTCCAGTTTAACCAAACAGCTTGGGAATACAAATGAAGAATCATTTGAAAACCTAGATCGGGTTGGGCATATTTCAAATTATGGATTGAGGAAAACATTAGAGAGCTCTTCCAATGCAACAAATCTCGTTGAGAAAAGTCCTATGACTTCTCAGATAGAGAATTTTGAGCTAAATGAATTCTATGACGAGATTGTTCATGAAATGGAAGAAATTTTACTAGACTCCTTTGATTCTCCTGGGACTAGGATTGCTCAGGGTAGTAGATTTCTTGAACCACAGTTTTCTCTGCCTTTAAGAGATGGCGGGTTGACTGCATCTACTTCTGGTACAGATGATGCTTATCTGCTAGTTCAGCACCCAATGAGAATAGATAAAATTGAAGTGGTAGGTGCCAGACAGAAGAAAGGAGATGTGTCTTTCAGTGAAAGATTGGTGGGGGTGAAGGAATACACTgtctataaaataaaagtgtgGAGTAACAAAGATCAATGGGAGGTTGAAAGACGATACCGTGATTTCCTCACTCTTCACCGTCGGTTGAAAGCTCTATTCACTGAGCAAGAATGGGTCTTACCTTTACCTTGGTCTTCAGTTGGAAAAGAATCCACAAAGATATTTGGAAGTGCATCTCCTGATGTTATTGCGCAGAGAAGTCTTCTCATTCAAGATTGTTTACAATCCATTCTGCATACCCGATTCTTTTCAAGTCCCCCAAGCGCACTAATTTGGTTTTTGTCCCCTCAAGATTCATATCCTAGTTCACCTGCATCAAATACGCTGGCGTCTCAGTCTCCTTTTACAAGCGGGACAAACAATGGAAACCTTTCCACTTTAGGTAAGACCATATCATTAATAGTTGATATTCCACCTAACAAATCTATGAAACAATTGTTGGAAGCACAATATAACACTTGTGCTGGATGCCATAAGCATTTTGATGATGGAAAAACTTTGATTATGGATCTTGTGGAGACATTTGGATGGGGAAAGCCTCGAATTTGTGAATATACTGGTCAATTATTCTGCTCTTCTTGCCATACAAATGAGACTGCAGTCTTGCCAGCAAGAGTTTTGCATCAATGGGATTTTACTAAATATCCAGTTTCTCAGCTGGCAAAATCTTATCTGGATTCTATACATGACCAGCCCATGCTTTGTGTCACTGCAGTTAATCCCTTCCTTTTGTCAAAGGTCCCAGCCTTGCTTCATGTTATGAGTGTCAGGAAAAAAATAAGGACTGTGCTTCCATTTGTACGTTGCCCATTCCGGAGGTCTATCAACAGAGGTCTTGGAACCCGGAGATATCTTGTTGAAAGCAATGACTTTTTCTCTTTAAGAGATCTTATTGACCTTTCCAGAGGAGCCTTTGCTGTTAGTTATGAAATGGTTTTGTTGCATTTTGATGGGCCTAGTGGGCTGAAAGTGTATTCTAGGAGGCAGAAAGGTCAGTGGGCAGCAAGGGCAGAACTGGAAATGACCCACCTATATCTAATTCTGACAGTAGCAGAGTTAGTGGAGGGGTGGAAGAGTGTACATAAGGCTGGTTCAGCACTTCCTGTTATGGTGGAAACCTTGTCATCAAAAATCCTGGAACACATCACTGATCAATGCCTCATATGTTGTGATGTTGGAGTCCCCTGCAATGCTCGACAAGACTGCAGTGACCCATCTTCTCTTATTTTCCCTTTCCAGGAAGATGAGATTGAAAAGTGCAAAACTTGTCAGTCGGTTTTCCATAAGCGTTGCTTTCGAAAGGTCAGCAGTTGTCCCTGTGGGGTGCACCTCAGATCGGATGAAACAATGAGCTTGACCAACAGAGTCAACCAGAGAAGGGAAATTGGTGAAACAAGAGGAACTTTGGATTTATTAGGGAGGGGTCTTGGTTCTGGATTCCTATCTGGTTTGTTTACAAAGGAAAAGCCCCAGAAGAGTAAGGAGCATAAAGACGAAAATATTATCTTGATGGGTTCCTTACCAAGCACTTCTCTATGA 3831 0.4124 MINGEGTREAASPDPFDSFPTLRVRQSDPSDASHPSSRYSSCGESEFDRYCSANSVMGTPSMCSTITVFNDFSELEFGSTKSFGIGGENGLENFSLGERVEMTPKDQRLSTSSVSDSMRDFRIGFGSENIRNQKNLKYGFSGLELYGDDNDELTMTMLDASSLMAVNQSDEKLEGDKGSENFSLSERVEMNQKDQRLLTSSVSEGMRDFRTGFGSEHIRNRQNLKYGSSGLELYGDDNGELTMTMADSSSLMGVNQSYEYLDQGGKDVVECSEVLKGHDELGGADDYSETMSSDAGDNAGHIETYLLSNVDEKCSQSKITVEGGLSSTVDKEDEFDSFDAQPNLQIDERELENEEDGNSSFCEDSEGEDSMHNYGSDDDKKKDFCLSRSIHHHQESKVQHENPLLINSSVAFGSDDLDDFLLENEENGQVSLMFDLFQSQKQRSPETEKKPRNLGSVSSRVISTSGQKVEGEDRNDQKDLSEPQVQVVRDFPAACCLVQGDDKVTNTRDSSSNASRDFPNMVILHQEDGREIIVAKNKCPKTEVDLDPLAEEVPQDMDLNVSNSNGGITEKANECMNKEAIVTSDVQLVENPEFDKSKFKFDHSSDSTVEPELSSLTKQLGNTNEESFENLDRVGHISNYGLRKTLESSSNATNLVEKSPMTSQIENFELNEFYDEIVHEMEEILLDSFDSPGTRIAQGSRFLEPQFSLPLRDGGLTASTSGTDDAYLLVQHPMRIDKIEVVGARQKKGDVSFSERLVGVKEYTVYKIKVWSNKDQWEVERRYRDFLTLHRRLKALFTEQEWVLPLPWSSVGKESTKIFGSASPDVIAQRSLLIQDCLQSILHTRFFSSPPSALIWFLSPQDSYPSSPASNTLASQSPFTSGTNNGNLSTLGKTISLIVDIPPNKSMKQLLEAQYNTCAGCHKHFDDGKTLIMDLVETFGWGKPRICEYTGQLFCSSCHTNETAVLPARVLHQWDFTKYPVSQLAKSYLDSIHDQPMLCVTAVNPFLLSKVPALLHVMSVRKKIRTVLPFVRCPFRRSINRGLGTRRYLVESNDFFSLRDLIDLSRGAFAVSYEMVLLHFDGPSGLKVYSRRQKGQWAARAELEMTHLYLILTVAELVEGWKSVHKAGSALPVMVETLSSKILEHITDQCLICCDVGVPCNARQDCSDPSSLIFPFQEDEIEKCKTCQSVFHKRCFRKVSSCPCGVHLRSDETMSLTNRVNQRREIGETRGTLDLLGRGLGSGFLSGLFTKEKPQKSKEHKDENIILMGSLPSTSL 1276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1406 1276 SUPERFAMILY PX domain 756 862 IPR036871 GO:0035091
Sto3g1406 1276 PANTHER PLECKSTRIN HOMOLOGY DOMAIN CONTAINING PROTEIN 1130 1276 - -
Sto3g1406 1276 PANTHER PLECKSTRIN HOMOLOGY DOMAIN CONTAINING PROTEIN 321 1076 - -
Sto3g1406 1276 MobiDBLite consensus disorder prediction 330 376 - -
Sto3g1406 1276 CDD PX_domain 751 851 - -
Sto3g1406 1276 SMART DUF4206_2 945 1210 IPR025258 -
Sto3g1406 1276 MobiDBLite consensus disorder prediction 23 43 - -
Sto3g1406 1276 PANTHER DIFFERENTIALLY EXPRESSED IN FDCP 8 HOMOLOG 1130 1276 - -
Sto3g1406 1276 PANTHER DIFFERENTIALLY EXPRESSED IN FDCP 8 HOMOLOG 321 1076 - -
Sto3g1406 1276 SMART PX_2 734 861 IPR001683 GO:0035091
Sto3g1406 1276 ProSiteProfiles PX domain profile. 744 864 IPR001683 GO:0035091
Sto3g1406 1276 MobiDBLite consensus disorder prediction 451 466 - -
Sto3g1406 1276 MobiDBLite consensus disorder prediction 441 484 - -
Sto3g1406 1276 Gene3D - 745 866 IPR036871 GO:0035091
Sto3g1406 1276 MobiDBLite consensus disorder prediction 330 348 - -
Sto3g1406 1276 MobiDBLite consensus disorder prediction 349 363 - -
Sto3g1406 1276 Pfam PX domain 771 860 IPR001683 GO:0035091
Sto3g1406 1276 MobiDBLite consensus disorder prediction 1 44 - -
Sto3g1406 1276 Pfam Putative zinc-RING and/or ribbon 945 1075 IPR025258 -
Sto3g1406 1276 Pfam Putative zinc-RING and/or ribbon 1130 1206 IPR025258 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1406 - - lang:109343381 946.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1406 3 10274292 10280809 Sto3g1406 3 10274292 10280809 ECH