Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1405 ATGGCGAAGATTTCGTCTACCTCTTTCTCCACTGTCTCTTCCTCTTCATTCATTCATCGGAATGTGTCTTCGACTCTTTTGCTCCGGCATTGTTCGTTTCCACATGCAATCTCTCCCCCAAAGCAGAACTTTGCGATTGCTGCTCAGGTCAACGTTGCTCAGAATGCTGGCGCGTCGATTGGGTCGTTCAGTCAGTTGATCGAGTCGTTGATTAATCGGGAGAATTTATCGGAATCCCAAGCTGAAGCTTCGCTTGACTTCTTATTGAACGAAGCGGATGAGGCATTGATAAGCGCTGTTCTTGTGCTTTTGAGAGCTAAAGGAGAGACGTTCGAAGAGATTGTGGGATTGGCAAGAGCGATGATCAAACATGCCAGGAAGGTTGAAGGATTGGATGATGGGGTTGACATTGTTGGAACTGGAGGCGATGGTGCAAATACTGTGAACATCTCAACGGGGGCTTCAATACTTACGGCAGCTTGTGGTGCCAAAGTTGCAAAGCAAGGAAACCGTTCAAGTTCTTCTGCGTGTGGAAGTGCTGATGTATTGGAAGAATTGGGAGTGGTTATTGATTTAGACCCTGAGGGAATAATAAGGTGTGTGAATGAAGTAGGGATTGGTTTTATGATGTCTCCAAAGTACCATCCTGCAATGAAGGTTGTTCGCCCTATAAGAAAAAAGCTAAAAGTAAAAACTGTGTTCAATATATTGGGTCCCATGTTGAATCCAGCACGAGTACCTTATGCAGTAGTTGGAGTATACACAGAAGATTTGTTATGTAGTTATTGCTTTCTTACAATTGTAGAGAAGCTTCAGATTATCAGATATGCACTAATGCCTTGGGTCTTCAAAATGGCTAAAGCACTTCAAagatttggtatgaaaagagctTTAGTTGTCCACTCGGAAGGCTTGGATGAAATGAGTCCTCTTGGTCCTGGTCTTGTACTTGACGTCACTCCAGAGAAGATTGATAAGTTCTCATTTGATCCGTTGGAGTTCAGCATTCCTCGGTGCAACCTTGATAACTTAAAAGGTGGTGGCCCAGAATACAATGCTGAGGTCCTGAAGCGTGTACTAGCTGGAGAGAGAGGGCATATAGCCGATGCTTTTGTTCTCAATGCAGCAGCAGCCCTCTTGGTTAGTGGTCATGTGAAGAACTTAGCTGAAGGAGTCTCTTTGGCACGAGAAACACAAGAATCTGGAAAGGCTCTAGAGACTCTCAACAAATGGAAGGATATCTCAAACGTGCTTCCCGGGGAATCCTTGGAACAAAGGCGAGTGAGCGGAGCAACCTATGAGCATGAACACGTTGTCGGCCGCCGGATTCATGTAAGGCTGGCGCCACGGCTCGACCGCGAAGCCGTTTCCCCGGCCACCGAGCACGATCCGCTCACAGGAATAAAACAGGTTGCTTTGGAATGGAATATAGTGAGATATTGCTTCTTGATGAATTTAACAGTGGAAGTGGTTCAAAGTTTAAAGCGAGCTTGCAAATTAAAGCATGTATTCATTGAGAAATTCTCGAGATTTTTGCACGAGAACTCGAGAAGGACGAGGTTCAGGGATTTTCGGTGTCGCCGTTATCTGAAACCTCGTTCGTATTCTTTAGTGCGATTGAGAGAATCTCACAAGCCAGAGCCGGAGCCATCTGGGAGGTTTGATTTTGTGTTCCTCCAGTAA 1683 0.4498 MAKISSTSFSTVSSSSFIHRNVSSTLLLRHCSFPHAISPPKQNFAIAAQVNVAQNAGASIGSFSQLIESLINRENLSESQAEASLDFLLNEADEALISAVLVLLRAKGETFEEIVGLARAMIKHARKVEGLDDGVDIVGTGGDGANTVNISTGASILTAACGAKVAKQGNRSSSSACGSADVLEELGVVIDLDPEGIIRCVNEVGIGFMMSPKYHPAMKVVRPIRKKLKVKTVFNILGPMLNPARVPYAVVGVYTEDLLCSYCFLTIVEKLQIIRYALMPWVFKMAKALQRFGMKRALVVHSEGLDEMSPLGPGLVLDVTPEKIDKFSFDPLEFSIPRCNLDNLKGGGPEYNAEVLKRVLAGERGHIADAFVLNAAAALLVSGHVKNLAEGVSLARETQESGKALETLNKWKDISNVLPGESLEQRRVSGATYEHEHVVGRRIHVRLAPRLDREAVSPATEHDPLTGIKQVALEWNIVRYCFLMNLTVEVVQSLKRACKLKHVFIEKFSRFLHENSRRTRFRDFRCRRYLKPRSYSLVRLRESHKPEPEPSGRFDFVFLQ 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1405 560 PANTHER ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE, CHLOROPLASTIC-LIKE ISOFORM X1 45 260 - -
Sto3g1405 560 PANTHER ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE, CHLOROPLASTIC-LIKE ISOFORM X1 282 417 - -
Sto3g1405 560 TIGRFAM trpD: anthranilate phosphoribosyltransferase 67 413 IPR005940 GO:0000162|GO:0004048
Sto3g1405 560 Gene3D Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 130 419 IPR035902 -
Sto3g1405 560 Hamap Anthranilate phosphoribosyltransferase [trpD]. 65 414 IPR005940 GO:0000162|GO:0004048
Sto3g1405 560 PANTHER ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE 45 260 IPR005940 GO:0000162|GO:0004048
Sto3g1405 560 PANTHER ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE 282 417 IPR005940 GO:0000162|GO:0004048
Sto3g1405 560 SUPERFAMILY Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain 63 128 IPR036320 -
Sto3g1405 560 Gene3D Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 51 129 - -
Sto3g1405 560 Pfam Glycosyl transferase family, helical bundle domain 65 125 IPR017459 -
Sto3g1405 560 SUPERFAMILY Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 135 412 IPR035902 -
Sto3g1405 560 Pfam Glycosyl transferase family, a/b domain 133 259 IPR000312 GO:0016757
Sto3g1405 560 Pfam Glycosyl transferase family, a/b domain 277 405 IPR000312 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1405 Sto-Chr3 10263584 10274244 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1405 K00766 - rcu:8288985 531.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1405 3 10263584 10274244 Sto3g1405 3 10263584 10274244 ECH