Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1404 ATGGGATCGGTTCTGGGTTCTCCCAAGAGCAAGGAAGAACGCGAAATGGCGTTGAACAAGGCTAAGGATATAGCATCCTCCGCTCCCGTCGTCATCTTCAGGTACTACTTGTCTTCAGCTCTTCACGCCGCCTTGAATTTCAGTATACTATTAGTTTTCTTGTTGTTGGATAACTTGATTATTATGCTTCAGTTTGTTCATTGTTGTATTTGGAATGGTAAACTTGCTGCTAAAGTGAGAAGTAAGATGTTCATCATTGACCTCCAATGTGAATTTTTGATTGATGCAGTTATAAGTTTATACTTAGTGGTTTGTAAGACGTACTGTGGTTACTGCAAGAGGGTCAAAGAGCTTCTCATACAGCTAGGAGTAGCATATAAAGTCATTGAATTAAATGAGGAGAGTGATGGAGGTGATATTCAGGCAGCTCTAGCTGAGTGGACAGGCCAAAGGACTGTGCCTAATGTGTTCATTGGAGGAAAGCACATCGGTGGTTGTGACACTGTTCTGGCGAAATACCAAGCTGGTCAACTTACTCCCCTTCTCAATGATGCTGGTGCCATCGCCAATAAGCAATAA 579 0.4249 MGSVLGSPKSKEEREMALNKAKDIASSAPVVIFRYYLSSALHAALNFSILLVFLLLDNLIIMLQFVHCCIWNGKLAAKVRSKMFIIDLQCEFLIDAVISLYLVVCKTYCGYCKRVKELLIQLGVAYKVIELNEESDGGDIQAALAEWTGQRTVPNVFIGGKHIGGCDTVLAKYQAGQLTPLLNDAGAIANKQ 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1404 192 Gene3D Glutaredoxin 98 192 - -
Sto3g1404 192 PRINTS Glutaredoxin signature 101 119 IPR014025 -
Sto3g1404 192 PRINTS Glutaredoxin signature 146 159 IPR014025 -
Sto3g1404 192 PRINTS Glutaredoxin signature 160 173 IPR014025 -
Sto3g1404 192 SUPERFAMILY Thioredoxin-like 103 188 IPR036249 -
Sto3g1404 192 PANTHER GLUTAREDOXIN-C1 100 191 - -
Sto3g1404 192 TIGRFAM GRX_euk: glutaredoxin 103 181 IPR011899 -
Sto3g1404 192 Pfam Glutaredoxin 103 163 IPR002109 -
Sto3g1404 192 PANTHER GLUTAREDOXIN 2 100 191 - -
Sto3g1404 192 ProSiteProfiles Glutaredoxin domain profile. 86 189 - -
Sto3g1404 192 CDD GRX_GRXh_1_2_like 103 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1404 Sto-Chr3 10256129 10257979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1404 102 188 Miscellaneous Gene Families AT4G15700 37.931 1.30e-13 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1404 K03676 - qsu:111991481 154.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1404 3 10256129 10257979 Sto3g1404 3 10256129 10257979 ECH