Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1399 ATGCATGGGCATGTTGAGGGTCACCGCTTAAGGTATTTAGTGCTGGTGATCAGATTTCATAGAGGAGAACCAGAGTTCGATGACATTGAATCTTGCGGTACTAAAGTTATAATCTACAATTTATGGTTCAATGATGATGGCAATTTGGAACTAGATTTTGATACAGATCCTGAGGATATTCGTATTGCTGGGGATATAAAAAAGGTTGATGTTCGTCCTGCCTGGAAGGAAATAAATGAGCAACATATTGCTAATCGGTTTCAGTACTCTTTACGTGTTTACTTGTCCATATTGTATTTGCGGGTGCCAGAAAACTTTAGAATTGTATTGCGAGGGCAAGTTCTGAAGCCTCATAATATAGCTGATGATCTTAAATATCCTGAATATATCTTGAGTAGTTATAGTGGAGAGTGGCAAACTGGCAATGGTTTAGCATATGGTGTTATGAAATTGAAGCTTGCACCCTTTTGGCGGGTTGTGAGCTACTTGGACAGCAGGGGTAGAGGAGTGGTTGGTATCCTGCAGGCAGATTTTGTTGAGCCATCTCATAATAAACAAGATTTTGAGAGAACTtcactgtttcaaaaacttgaagcACGCTTGAAGGAAATGACATGGGAATACTGGGATTATCATTGTGCACTAATTGGGTATCAGGAAAAGAAAAAGCCTCGAGTTCCGGTTACACAATTGGAATCATCTCATCACAACCCACCTGGTATAGAAAAACCACTCATATATGCCAAAAGTCCTTCACCTGTTCTCAATAAAAATGCAGCATATGGAAAACCTGAGCATCTAACACCCAATTCACAAAGTAAATCTCAGCAAGGATCTCCTACTAAGCGGAAGATGTATGAATTGATAAACcttgagaagatgaaaaagcATGCAACGGAAGAGAATGTTAGTGGTGTTGTGTGCAGTCAAGAGAATATACAGACGTTGTCAAATCCTACTAATCAAGTGGTAGACCAAGAGACTATAAACTTGATTCAGGAAAACAAGAAGCTCCGTGCAAAATGTTTGGAATATGAAAAGGAGGAGGACGAACTTAATTCAAAGGTGACAGAGCTTAGAAGTAAAGTAGAAGAAACTCAGCTTGAGTATACTCGGCTTTTGGCTGAACTACAGTCTATAGACTTGGAGTACTTTACGGCTTACCCATATGGGGGGGTTGAGGGTCATGAGGTCACAGCGAACTGCCATCCAGTGCCCAACTTCCGAGCCCTCCATCTCCATGGTTTCCGAGCCTCCCCTGTAAATTGA 1269 0.398 MHGHVEGHRLRYLVLVIRFHRGEPEFDDIESCGTKVIIYNLWFNDDGNLELDFDTDPEDIRIAGDIKKVDVRPAWKEINEQHIANRFQYSLRVYLSILYLRVPENFRIVLRGQVLKPHNIADDLKYPEYILSSYSGEWQTGNGLAYGVMKLKLAPFWRVVSYLDSRGRGVVGILQADFVEPSHNKQDFERTSLFQKLEARLKEMTWEYWDYHCALIGYQEKKKPRVPVTQLESSHHNPPGIEKPLIYAKSPSPVLNKNAAYGKPEHLTPNSQSKSQQGSPTKRKMYELINLEKMKKHATEENVSGVVCSQENIQTLSNPTNQVVDQETINLIQENKKLRAKCLEYEKEEDELNSKVTELRSKVEETQLEYTRLLAELQSIDLEYFTAYPYGGVEGHEVTANCHPVPNFRALHLHGFRASPVN 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1399 422 Pfam Morc6 ribosomal protein S5 domain 2-like 154 209 IPR041006 -
Sto3g1399 422 Pfam Morc6 ribosomal protein S5 domain 2-like 89 131 IPR041006 -
Sto3g1399 422 MobiDBLite consensus disorder prediction 227 282 - -
Sto3g1399 422 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 154 378 IPR045261 GO:0016887
Sto3g1399 422 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 25 131 IPR045261 GO:0016887
Sto3g1399 422 PANTHER PROTEIN MICRORCHIDIA 6 25 131 - -
Sto3g1399 422 PANTHER PROTEIN MICRORCHIDIA 6 154 378 - -
Sto3g1399 422 Coils Coil 328 383 - -
Sto3g1399 422 MobiDBLite consensus disorder prediction 265 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1399 Sto-Chr3 10208302 10217129 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1399 - - gmx:100795667 422.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1399 3 10208302 10217129 Sto3g1399 3 10208302 10217129 ECH