Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1394 ATGTGGAAGCAAGGGCTGGTGTGTGTGGCGATCAACGTCATCTGTTTCGTTTCGGTATGTGGTGCGATCGAATCCCCACAGTACTCGGTGGTCCACTTGGAGTCCGATTTCGAGATCAGATTCTATATGCGGTCCGTTTGGATGTCTGCCTCTGCTCAAGATATTTCCTTCGAGAAGGCTACCTGGAATGGCTTCCACAGGTTGTTCCAGTATATACAAGGTGCTAACCTGAACTTCTCTAGAATTGCAATGACTTCTCCAGTGTTGACTAGCATAGTCACGGGTGCCGGTCCCCTACACTCATCAGCCTACTTTGTTAATTTTTACTTGCCTGTGAAGTTCCAAGCTAGTCCACCTCTCCCACTTCCTGAACTACATCTCAAGCCCTATAAATGGGACTGCCACTACGTCGCTGTCAGAAAGTTCTCCGGATTTGCAAGGGATGACAACATTGTAAAGGAGGCAGAAAAACTTGCCACAAGCTTGAGCAGATCTCCATGGGCAAATGCAACATCTTCCAAGAGTCCATTGGCTTACTCAATTGCTCAATACAATTCTCCCTTTCGGATTTTTGGGCGTAGAAACGAGGTTTGGGTGGATATTGAAGTGCCTGAATTAGATGGTTGTGATGAATTGGTTGGTGTTGCAGCATATTGA 657 0.4658 MWKQGLVCVAINVICFVSVCGAIESPQYSVVHLESDFEIRFYMRSVWMSASAQDISFEKATWNGFHRLFQYIQGANLNFSRIAMTSPVLTSIVTGAGPLHSSAYFVNFYLPVKFQASPPLPLPELHLKPYKWDCHYVAVRKFSGFARDDNIVKEAEKLATSLSRSPWANATSSKSPLAYSIAQYNSPFRIFGRRNEVWVDIEVPELDGCDELVGVAAY 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1394 218 Gene3D Regulatory factor, effector binding domain 22 205 IPR011256 -
Sto3g1394 218 Pfam SOUL heme-binding protein 23 199 IPR006917 -
Sto3g1394 218 SUPERFAMILY Probable bacterial effector-binding domain 13 201 IPR011256 -
Sto3g1394 218 PANTHER SOUL HEME-BINDING PROTEIN-RELATED 9 210 - -
Sto3g1394 218 PANTHER HEME-BINDING PROTEIN-RELATED 9 210 IPR006917 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1394 Sto-Chr3 10177454 10180264 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1394 - - vvi:100248414 318.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1394 3 10177454 10180264 Sto3g1394 3 10177454 10180264 ECH