Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1369 ATGTGGAGGAGACTTTACGTGTGCGTTCTAGAAGCCAAAGACTTGCCCGTCCAGAATTCCTATGTGAAACTTAAACTCGGCAAGTTCAAGTCCAAGTCCAAGACTAGGATATTGAGGCACTCCTCAAACCCTGTTTGGTATGAAGAGTTCGTATTCAGAGTCCATGACATAGACGACGCGGGCGAGCTTATTGTTTCTGTTTTCAGTCACAATGATGAAGAATCCTTAGTCTTCAATAATGGTTCTCCTGATTTACTTCTGGGTGAGGTACGGATTTTGGTAGCCTCAGTTGCTTGTCAGGATAAGCAAACCTTGCCGCCTACGTGGTTCTCTCTTGGAACATCCAAGAGTGGGAAATTTTTCAATACATACTgtgGGAAAATTCTTCTGACCATTTCTCTTCACGGAAAAGGCCATGCTTCTTTCCTCAATCATATGCACACTCCAAGTTCAAATATTGCTATAGAAGACCCTAAAGACTTTGCAAGTCCACGCATTTCATCTTGGAACAATTTAATCTCCAAAACTCCAGCTTGCTGCAAAATGGGTGAAGGAAAACAGCTGTTGAAGGTTATTGCTAGATATGCTAATCGTTTGGACAAGGTTTTCAGTAAGAAAGAAGAAAGTTTAAAAGCTGATGATTCTTCAGAACCAACCAGTTTGTTATCAGATAACGAAGAACTTGTACAGGACTTTCCATCTCCTTGTAGCTTTGAAGAAGCCATTGCATCAATAGAGTCAAGAGATAATAATAAACAAGAAATGCCTGAAAATCTGCTGGGTGGTATCCTAGTGGATCAGATCTATTTGGTGTCTCCATATGATCTTAATGCTTTTCTTTTTGCACCCAATTCTCAATTCAGGAGAGAGTTGGCTGAACTGCAGGGAACCACAAATATCCAAGAGGGGCCTTGGACATGGAAATCTGGAGATATGTCTTGTTTAACGCGAGTTGTTTCGTATACAAAAGCTGCTACAAAGTTAGTTAAGGCGGTTAAGGCCACCGAGGAGCAAACCTATGTTAGACTGAGTAAAGAGGAATTTGCTGTACATGTTAATGTAAGCACACCTGAGGTTCCATATGGGAATTCATTTAGGATTGAATTGCTTTACAAGATAATGCCTGGAAAAGAAGAGGAATCCTCTCATCTTGTGGTGTCCTGGGGCATTGTCTACCTGCAAAGCACAATGATGAAAGGTATGATAGAAAGCGGTGCTCGTCAGGGATTGAAGGATAGTTTTAACCAGTTTGCCAACCTACTTGCTCAGAAATTCAAGGTGCTAAATTCTGGAGATTCATCAGACAAAGAGCAGGTGTTGGCAAATTTGCAAACAGAAGAACAGTCTAATTTGTGCAAAATCCAAGGCCTGGAATTTAAGGGGCTTGACTTGCCAGACAGCTTAGGAGAGCTCATTACAAGTGGAATATTAGTTATCCAGTTGCAGCGTGTTTTTAATATGGTCTTTCACTTTGTACAAGCTAGATTTCAAATGGGAAGTGATCATGGCCTGAAAGGCCATGGTGATGGATGGGTTCTAACTGTGGCTTTAATTGAGGGGGTTGACCTGGCATCCTTGGAGTCATCAGGATTGTCAGATCCCTATGTGGTTTTCACCTGCAATGGAAAAACAAGGTCAAGCTCTGTCAAGCTTCAGACAAGCAATCCTCAATGGAATGAGATATTAGAGTTTGATGCCATGGAAGAACCGCCATCAGTTTTAGATGTGGAAGTATTTGATTTTGATGGTCCATTTGACCAAGATGTTTCCCTTGGACACGCCGAGATCAATTTCTTGAAGCACACATCTACTGAATTGGCAGACATGTGGGTTTCCCTTGAAGGAAAGCTCGCTCAGTCTGCCCAATCGAAGTTGCATTTGAGAATTTTTCTGGACAATAATAAAGGAGTTGAAACAATTAGAGGTTACTTGATGAAGAAGGAAAAGGAAGTTGGCAAAAAGCTGAATCTTCGATCCCCTCAAAGGAATTCTACATTCCAGAAATTGTTTGGATTGCCTGCAGACGAATTTCTAATCAGTGATTTCACGTGCTACCTGAAGAGAAAATTGCCTTTACAGGGTCGCCTGTTTCTCTCTGCAAGGATTCTGGGGTTTTATGCCAACTTTCTTGGACATAAAACCAAATTTTTCTTCCTTTGGGAGGATATCGAAGACATCCAAGTACTTCCTCCTTCTCTGGCATCCATAGGTAGCCCTACATTGGTCATAATTCTTCGAAGGGATCGGGGTCTTGATGCAAGGCATGGTGCGAAGACTCAAGATGAAGAAGGCAGGCTTAGGTTCCATTTTCAGTCGTTCGTGTCATTTGGTGCCGCCTCCAGgacaataaaGGGCTTGTGGAGAACAAGAACACTGACCCCTGATCAGAAAGCTCAACTTGCAGAGGAGCAGGAGGATCAAGAGGAAGGCTTTGTAATTCCTGAAGACTCAGAATCTATTCTGGATGAGGAAGCAATGATGTCCAAGATTTACTCTGCAGAATTTCCAATTAAGATGAGATCACTGATGGAATTGTTTGATGGAGGAAACCTTGAACATAAGATTATGCGGAAAACTGGATGCATTAATTATGCAACAACATCCTGGGAATGTGTAAAGCCCGACGTCTTCGAAAGACGCGTTTCATACAAATTCAATCGCCACGTATCGGTTTTCGGCAGTGATGTCACATGCACTCAACAAAAAGTTCCAATTGAAAACACTGGAGGCTGGATTGTTAAAGAGGTTATGGCCCTTCATGGTGTCCCATTTGCTGATCACTTCCGTATTCACTTCAGATaccaaattgagaaatctcCTCTGGGTGACTGTGCTTGCAAGTGTGATGCTTATATAAAGATCATGTGGTTTAAAAGCTCCAAGTTTCAGGAAAGGATCAATGGGAACATAACGGCTAAGTTTACAAACCGATTGAAGGAAATATTTGAGATGCTTCAGAAAGAGGTTTTGCTAATGTCTCAGAAGGATGGTATCATTGAAGCAGTAATTAGGTAG 3015 0.4149 MWRRLYVCVLEAKDLPVQNSYVKLKLGKFKSKSKTRILRHSSNPVWYEEFVFRVHDIDDAGELIVSVFSHNDEESLVFNNGSPDLLLGEVRILVASVACQDKQTLPPTWFSLGTSKSGKFFNTYCGKILLTISLHGKGHASFLNHMHTPSSNIAIEDPKDFASPRISSWNNLISKTPACCKMGEGKQLLKVIARYANRLDKVFSKKEESLKADDSSEPTSLLSDNEELVQDFPSPCSFEEAIASIESRDNNKQEMPENLLGGILVDQIYLVSPYDLNAFLFAPNSQFRRELAELQGTTNIQEGPWTWKSGDMSCLTRVVSYTKAATKLVKAVKATEEQTYVRLSKEEFAVHVNVSTPEVPYGNSFRIELLYKIMPGKEEESSHLVVSWGIVYLQSTMMKGMIESGARQGLKDSFNQFANLLAQKFKVLNSGDSSDKEQVLANLQTEEQSNLCKIQGLEFKGLDLPDSLGELITSGILVIQLQRVFNMVFHFVQARFQMGSDHGLKGHGDGWVLTVALIEGVDLASLESSGLSDPYVVFTCNGKTRSSSVKLQTSNPQWNEILEFDAMEEPPSVLDVEVFDFDGPFDQDVSLGHAEINFLKHTSTELADMWVSLEGKLAQSAQSKLHLRIFLDNNKGVETIRGYLMKKEKEVGKKLNLRSPQRNSTFQKLFGLPADEFLISDFTCYLKRKLPLQGRLFLSARILGFYANFLGHKTKFFFLWEDIEDIQVLPPSLASIGSPTLVIILRRDRGLDARHGAKTQDEEGRLRFHFQSFVSFGAASRTIKGLWRTRTLTPDQKAQLAEEQEDQEEGFVIPEDSESILDEEAMMSKIYSAEFPIKMRSLMELFDGGNLEHKIMRKTGCINYATTSWECVKPDVFERRVSYKFNRHVSVFGSDVTCTQQKVPIENTGGWIVKEVMALHGVPFADHFRIHFRYQIEKSPLGDCACKCDAYIKIMWFKSSKFQERINGNITAKFTNRLKEIFEMLQKEVLLMSQKDGIIEAVIR 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1369 1004 CDD C2 5 112 - -
Sto3g1369 1004 Gene3D C2 domain 497 631 IPR035892 -
Sto3g1369 1004 SMART gram2001c 664 730 IPR004182 -
Sto3g1369 1004 Pfam C2 domain 4 111 IPR000008 -
Sto3g1369 1004 Pfam C2 domain 512 613 IPR000008 -
Sto3g1369 1004 PANTHER C2 AND GRAM DOMAIN-CONTAINING PROTEIN 452 995 - -
Sto3g1369 1004 PANTHER C2 AND GRAM DOMAIN-CONTAINING PROTEIN 4 451 - -
Sto3g1369 1004 CDD C2 513 613 - -
Sto3g1369 1004 ProSiteProfiles C2 domain profile. 1 110 IPR000008 -
Sto3g1369 1004 Pfam GRAM domain 665 766 IPR004182 -
Sto3g1369 1004 ProSiteProfiles VASt domain profile. 826 989 IPR031968 -
Sto3g1369 1004 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 140 IPR035892 -
Sto3g1369 1004 Gene3D - 662 789 IPR011993 -
Sto3g1369 1004 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 511 635 IPR035892 -
Sto3g1369 1004 PANTHER BNAA05G37250D PROTEIN 4 451 IPR044511 -
Sto3g1369 1004 PANTHER BNAA05G37250D PROTEIN 452 995 IPR044511 -
Sto3g1369 1004 Gene3D C2 domain 3 150 IPR035892 -
Sto3g1369 1004 Pfam VAD1 Analog of StAR-related lipid transfer domain 264 409 IPR031968 -
Sto3g1369 1004 Pfam VAD1 Analog of StAR-related lipid transfer domain 830 970 IPR031968 -
Sto3g1369 1004 ProSiteProfiles C2 domain profile. 492 611 IPR000008 -
Sto3g1369 1004 ProSiteProfiles VASt domain profile. 260 429 IPR031968 -
Sto3g1369 1004 SMART C2_3c 512 611 IPR000008 -
Sto3g1369 1004 SMART C2_3c 4 106 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1369 Sto-Chr3 9928307 9932706 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1369 5 166 Lipid Metabolism Gene Families AT1G22610 29.143 2.10e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1369 - - gmx:100811103 1433.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1369 3 9928307 9932706 Sto3g1369 3 9928307 9932706 ECH