Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1367 ATGGCTTCTACTTTGGTTGTAAAGgtcaaatgtGAAGATATCCTGAGGCGATTTAACGTTCGTGTGAAGGAGAAAAATGAACTAGATATTGATATTGTAGGATTAAGATTCAAGATCATTTCACTTTTCTTATTTCTTGCGGATTCTAATTTTATCTTGAGATACGTGGATGAAGATGGCGATTTGGTGACACTAGTGGACGATGATGATTTGCGTGATATTATGAGGCAGAAGCTGAAATTCTTGAGAATTGACGTAGTAGAAATTACCAATGAAAGTGATGATTTATACAATATTGCTCCAACATTTCCTCCCTTGAAGAATCCATTTACTAGTGCCAATATTGCTTTTGCTTTTGAAGCATTCAAGTCTCTCGCAAAACCATTGTGTGTGTTTGCTTCCAATGCAACACTTGACTTGGTTTCAAAACTTGTATCTTCAATTGAGCTCGACCTTTTTGAAGATGATTCCGATCCATCTCAATTCACAGAGGTGAATACTGCATCATCAGTGGTTGCTAATGGTGGTGATGATGGCAAAGAGGTGGAAATAATGGATAGTACTGTTGTTAaggatgaaaatgagaatgatattTGTTTGATATCCAATGCAAAAAAGGATTCTAGTCAGAGTGTTATGtctcatgatgatgatgatgactacTCTGGTGGTTGTGGCATTCATAAATTAGATGGGCATGGGCCTTGGCCTTGGCGTTGGATTAGATCCCAAAGTAGAGAATCACAAGAGGATGGCTTTTGCAAGTGTGGCATTTGCTTTGATAATTTGAGAGATGGTTCGTATAATGGGGCTGCTGATTATATCAGAATGGACGATCCTGTGTTGGATGGCATAGATGAACGTCCTCCTCCTCGCACAGGTTCTTGTGGTACAACATTTCCAGCAGCAAAATCTACTGGGAATTATATGATTCCTATGCTAGATAGTGAGTTCACTTTTGATGTGAATGTAGTAGATGGTACGAAAATGGCACCATCTACTAAATTTACAAAGATTTGGCGAATGCGCAACACTGGAATTATAGCGTGGCCTCAGGGAACTCAAATGGTTTGGATTGGAGGAGACAAAATTAGTGACTTCAATTCAGTCACTTTGAAGATTCCTCCAAATGGTGTCTCTGTACACAAGGAATTTGACGTTGCAATTGAATTTAGAGCACCTAAATCACGTGGAAATTACCTTTCATACTGGAGGATGGCTTGTCCATCCGGTAGCGAATTTGGTCAAAATGTTCGGGTTTTTATTCAGGTTGATGATGTTCCTCAAGTTCTGACCTTGAAAAAATGGCCTACGGCTAAAGACACCAATGTTGAACCTGTTGTGGATGATGAtgcctctcttcaatcctacaATAGTTATAATGCAGATTTCAGTGAAGATATGAAGGatgtatcatcatcatctctggTTGAAAAAATTGAACGTTTAGAGGTGGCTGTGCGGAAGGAGCTTAAGGAGATGGGGTATGAGAAGAAAATTCTGGAAGAATCTCTGGAAGATCTATTTGGTGGTTCTATGTGGGAGGCTATCATTAATGGAAGGGTTAAGATTAGCGATGGTAATTAA 1587 0.3693 MASTLVVKVKCEDILRRFNVRVKEKNELDIDIVGLRFKIISLFLFLADSNFILRYVDEDGDLVTLVDDDDLRDIMRQKLKFLRIDVVEITNESDDLYNIAPTFPPLKNPFTSANIAFAFEAFKSLAKPLCVFASNATLDLVSKLVSSIELDLFEDDSDPSQFTEVNTASSVVANGGDDGKEVEIMDSTVVKDENENDICLISNAKKDSSQSVMSHDDDDDYSGGCGIHKLDGHGPWPWRWIRSQSRESQEDGFCKCGICFDNLRDGSYNGAADYIRMDDPVLDGIDERPPPRTGSCGTTFPAAKSTGNYMIPMLDSEFTFDVNVVDGTKMAPSTKFTKIWRMRNTGIIAWPQGTQMVWIGGDKISDFNSVTLKIPPNGVSVHKEFDVAIEFRAPKSRGNYLSYWRMACPSGSEFGQNVRVFIQVDDVPQVLTLKKWPTAKDTNVEPVVDDDASLQSYNSYNADFSEDMKDVSSSSLVEKIERLEVAVRKELKEMGYEKKILEESLEDLFGGSMWEAIINGRVKISDGN 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1367 528 Pfam Ig-like domain from next to BRCA1 gene 323 424 IPR032350 -
Sto3g1367 528 Gene3D - 1 88 - -
Sto3g1367 528 ProSiteProfiles PB1 domain profile. 4 87 IPR000270 GO:0005515
Sto3g1367 528 Gene3D Immunoglobulins 309 430 IPR013783 -
Sto3g1367 528 PANTHER PROTEIN ILRUN 1 496 - -
Sto3g1367 528 PANTHER OVARIAN CARCINOMA ANTIGEN CA125-RELATED 1 496 - -
Sto3g1367 528 SMART PB1_new 4 89 IPR000270 GO:0005515
Sto3g1367 528 Pfam PB1 domain 41 86 IPR000270 GO:0005515
Sto3g1367 528 SUPERFAMILY CAD & PB1 domains 4 77 - -
Sto3g1367 528 CDD NBR1_like 312 425 IPR032350 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1367 K17987 - ath:AT4G24690 191.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1367 3 9918813 9922260 Sto3g1367 3 9918813 9922260 ECH