Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1320 ATGACGATCACGGCGGCGCCGAGCGTCGTTGACGGTTGCCTTATCGTGAGAGGCAAGGTGGTTCTGACTGAAGTCCCCGGAAACATCTCGGTTTCTCCGATTGGCGCAGCCTCTGCTTTCTTGGGTGCCACTTCACCCGTTTCACGTTCTCGTCATGTCTTCACTCTTGGCACTCTCCAGGAATACAAGTTGTTGTGTCTATTCAGAGTGAAAATATGGTGGATGATCCCGCGAGTGGGAAAGCGTGGGTGTGAAATTCCCGTGGAGACTCAATTTCTGGTATTGGAAGCGAGGGAAGAGTGTGCTTTGGACGGCGATGATGATGAGTCTTCGGAGGATCCAACGGCGGATAATAGCTTTTACATTCTCTTCTTGCCTTTTCTGGATGGACAGTTTCGTGCAACTTTGCAAGGAACTCCAGCCAATGAGCTCCAGTTCTGCATTGAAAGTGGAGATGCTTGTGTTCAAACTAGCCAATCCCTAGAAGCGGTGTTTGTGAATTCAGGGGACAACCCATATGAGCTAATAAAGGATTccatcaaGGTATTGGAGAAATACAAAGGCGGTTTTAGCCATGTTGAGAACAAAAAGACGCCTGTACATCTTGATTGGTTTGGATGGTGCACTTGGGATGCCTTCTACACTCAAGTTAGTCCACAAGGAATCAAAGAGGGACTTCAaagTTTCTCACAAGGAGGTTGTTCACCAAAGTTTCTCATCATTGATGATGGATGGCAAGAGACCGTCAATGAGTTTCACAAACAAGGCCAACCTCTAATTGAAGCAACACAGTTCGCAACCAGATTGACAGACATCAAAGAAAACAACAAGTTCAGGAGCAGTACAAGTTCAACCTCAGACAGTTCATGCAACAATCTCAATGATTTTGTTGATTCCATCAAAGACAACTTTGGACTAAAGTACGTGTACATGTGGCATGCTTTAGCTGGTTATTGGGGAGGAGTGCTTCCATCATCAGAAGCAATGAAGAAATACAACCCAAAGCTTGCATGTCCAATACAGTCACCTGGCGTCACAGGGAACCTTAGAGACATAGCCATGGATAGCTTGGAAAAATATGGAGTGGGATTAATAGACCCAGAAAAGATCTATGACTTTTACAATGACTATCATAGTTATCTGGCAAGCTGTGGTGTGGATGGAGTCAAAGTAGATGTCCAGAATCTGATAGAAACTTTGGGTTCTGGTTATGGTGGACGTGTTTCATTGACAAAAAAGTACCAAGAAGCACTAGAACAATCTATAACAAGCAACTTCAAGGACAATAACCTTATTTGTTGCATGTCCCACAATTCGGACTCTATTTACAGTTCAAAGAAGAGTGCAGCCGCAAGAGCATCGGAGGATTTCATGCCAAGAGAACCAACATTTCAAACCTTACACATTGCCTCTGTAGCTTTCAATAGTCTTCTTCTTGGGGAGATAGTCGTGCCAGATTGGGACATGTTCCATAGTAAGCATGAAACAGCTGATTTCCATGGTGCAGCAAGAGCAATAGGTGGCTGTGCAGTTTATGTAAGTGACAAGCCTGGAAATCATGATTTTGAAATCCTCAAGAAGTTGGTACTACCTAATGGATCAATCTTGAGAGCAAGATATGCTGGTCGTCCCACTAGGGATTGTTTGTTCGAAGATCCTGTTATGGACGGTAGAAGTTTGTTGAAGATTTGGAACTTGAATAAGGTAAGTGGGGTGATAGGTGTGTTCAATTGCCAAGGGGCAGGAAGCTGGCCTTTGAAACCAGAGGAAGCAAAACCCACTCACATAAGCATCTCAGGGAAAGTGAAGCCCATGGATGTTGAATTCCTTCAGGAGGTTGCAGGTATGCTTTCGAAGTTACCATTGAAAGGAAAGCTAGAAGTGTTTGGTGGTGATGACaaagtcctcgaatttgcaccAATAGGATTGCTTGACATGTACAATTCAGGAGGAGCAGTGGAAGCTCTGGAATTTTCCAGCATGGACGATGTTTCAGAGTGCATAACAAGAATCAAAGGAAGAGGGTGTGGTCGTTTTGGAGCCTACTCAAGCATGAGACCCAAACGTTGTATGGTGGATATGAAGGAGGAGGAGTTTTCATTCAACGAAAAAGATAAATTGCTGACAATTGTACTTGAAGGAGAAGGCAATTTGAGGGATATTGAGTTTGTTTACTGA 2178 0.4343 MTITAAPSVVDGCLIVRGKVVLTEVPGNISVSPIGAASAFLGATSPVSRSRHVFTLGTLQEYKLLCLFRVKIWWMIPRVGKRGCEIPVETQFLVLEAREECALDGDDDESSEDPTADNSFYILFLPFLDGQFRATLQGTPANELQFCIESGDACVQTSQSLEAVFVNSGDNPYELIKDSIKVLEKYKGGFSHVENKKTPVHLDWFGWCTWDAFYTQVSPQGIKEGLQSFSQGGCSPKFLIIDDGWQETVNEFHKQGQPLIEATQFATRLTDIKENNKFRSSTSSTSDSSCNNLNDFVDSIKDNFGLKYVYMWHALAGYWGGVLPSSEAMKKYNPKLACPIQSPGVTGNLRDIAMDSLEKYGVGLIDPEKIYDFYNDYHSYLASCGVDGVKVDVQNLIETLGSGYGGRVSLTKKYQEALEQSITSNFKDNNLICCMSHNSDSIYSSKKSAAARASEDFMPREPTFQTLHIASVAFNSLLLGEIVVPDWDMFHSKHETADFHGAARAIGGCAVYVSDKPGNHDFEILKKLVLPNGSILRARYAGRPTRDCLFEDPVMDGRSLLKIWNLNKVSGVIGVFNCQGAGSWPLKPEEAKPTHISISGKVKPMDVEFLQEVAGMLSKLPLKGKLEVFGGDDKVLEFAPIGLLDMYNSGGAVEALEFSSMDDVSECITRIKGRGCGRFGAYSSMRPKRCMVDMKEEEFSFNEKDKLLTIVLEGEGNLRDIEFVY 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1320 725 Pfam Raffinose synthase or seed imbibition protein Sip1 9 616 IPR008811 -
Sto3g1320 725 Pfam Raffinose synthase or seed imbibition protein Sip1 635 710 IPR008811 -
Sto3g1320 725 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 2-RELATED 1 616 - -
Sto3g1320 725 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 2-RELATED 634 725 - -
Sto3g1320 725 SUPERFAMILY (Trans)glycosidases 200 536 IPR017853 -
Sto3g1320 725 Gene3D Aldolase class I 198 529 IPR013785 -
Sto3g1320 725 PANTHER - 634 725 IPR008811 -
Sto3g1320 725 PANTHER - 1 616 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1320 Sto-Chr3 9584793 9589760 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1320 1 712 Glycoside Hydrolase AT1G55740 48.138 0.0 677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1320 - - gmx:100816978 1130.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1320 3 9584793 9589760 Sto3g1320 3 9584793 9589760 ECH