Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1317 ATGGTTATACTCAACACTCTGTCTAGCTACTCATGGCATGCAAAAGTTGTGCTATCCTTGGCAGCTTTTGCTGTCATATTTGGGGAATTCTGGCTTGTTTCTCAGCTCAGTGCAGCAAATAATACACTTGCCAAATCTGTGTCCCTCCTCAAGCAACTTCCTGACATTGTGGAGAATCCCTCCTCTCTGAAACCCCAGTTTGATGCACTCAATAAGCTAGTGAAGGCAGCACTGGATGTCACCATTTCTATCATTGACTTCAAGGAACTTCCATCTGAGTACATCTCAGAGGACACTCCTCCTATGTCTGTGGCCAGTGCTCATATCCCTATTGCTGCTTATTGGACTATTAGAAGTATTGTGGCTTGTTCCACACAGATTGCTAGTCTTATAGGCTTgagaaatgaGTACTTTTCACAGGCCTCAGAATCTTGGGAATTATCAAGTTTGGCTTATAAAGTTAATAGCATTTATGAACACCTCAAGAGTCAATTGGAAATCTGCCACCAGTATATAGATGAAAAGAGACACATAGAGGCCTTTCATAATTTGGTTCATCTTTTCGAGACAAGTCACGTAGATAACCTGAAAATCCTCAGAGCACTAATCTACGCCAGGGATGATCAACCACCACTTATAGATTGTTCTAACAGATCAAAGGCTACTCTCGAGGTATTAAGGAGGAAACATGTGTTGTTGCTCATATCAGATCTTGATCTTTCACAAGAAGAGATTATGATACTTGATAACTTGTACAAAGATGCAAGATCAAGAGGTGACACACACTACGAAATGGTATGGATCCCAATTGTGAGCAAATCAGCCTGGAATGATCTGAATAAGAGGAAGTTTGAGCATTTGCAGTCATCAATGGCATGGTATAGTGTGCGTGATCCTCTCATCATTGAACCTGCAGTGACTAAGTATATCAAAGAGGTATGGAATTTCACAAAGAAAGCTATAGTAGTGGCTCTGGATCCACTAGGTAAATTGTCTTCTCCAAATGCACTTCACATGATTTGGATATGGGGAAACTTGGCCTTCCCATTCACACATGAGAGAGAGGAAAGCTTGTGGAAGTCAGAGACTTGGAGCCTTGAGCTACTTGTTGATGGCATTGATCCTACAGTTCTGGAATGGATGTCAGAAGGAAAGTTCATATGCATATATGGAGGTGAAGATCTTGAATGGATACAAACATTCACAAGCACTACATTATCTGTAGCAAAATCTGCAAACTTATCACTAGAGATGGTTTATGTGGGAAAGAGCAATGCCAAAGAGAGAATGCAGAAAATGATCACAACCTTCAACACAAGAAAGTTCAGTTACTTTTGGCCTAATGTCACCTCCATCTGGTTCTTCTGGGCAAGACTAGAAAGCATGTTGTACTCAAAGTTGCAGCAGGGGAAGACTGTGGAGGATGACCAAATTCTGGGTGAAGTCATGACTGTACTTAGCTTCGACGGAAGCGATCGCGGGTGGGCGATTTTCTGTAGAGGGACAAATGAAATGGCCAGAGCAAAAGGAGATTTGGCTCTCACAAGCCTTAGGGAATTTGAGCAATGGAGGGAGAATTCTGAGAGAGATGGTTTTGTGCTGGCATTGAAGGAATACTTGCAAGAACTTCACACCCCACATCACTGTAATCGTCTTATACTTCCTGGGAGTGCAGGAGGCATACCAGAGAGAGTTGTGTGTGCTGAATGTGGCCGTCAAATGGAGAAGTACTTCATGTATCGTTGCTGTGTGgagtaa 1758 0.4209 MVILNTLSSYSWHAKVVLSLAAFAVIFGEFWLVSQLSAANNTLAKSVSLLKQLPDIVENPSSLKPQFDALNKLVKAALDVTISIIDFKELPSEYISEDTPPMSVASAHIPIAAYWTIRSIVACSTQIASLIGLRNEYFSQASESWELSSLAYKVNSIYEHLKSQLEICHQYIDEKRHIEAFHNLVHLFETSHVDNLKILRALIYARDDQPPLIDCSNRSKATLEVLRRKHVLLLISDLDLSQEEIMILDNLYKDARSRGDTHYEMVWIPIVSKSAWNDLNKRKFEHLQSSMAWYSVRDPLIIEPAVTKYIKEVWNFTKKAIVVALDPLGKLSSPNALHMIWIWGNLAFPFTHEREESLWKSETWSLELLVDGIDPTVLEWMSEGKFICIYGGEDLEWIQTFTSTTLSVAKSANLSLEMVYVGKSNAKERMQKMITTFNTRKFSYFWPNVTSIWFFWARLESMLYSKLQQGKTVEDDQILGEVMTVLSFDGSDRGWAIFCRGTNEMARAKGDLALTSLREFEQWRENSERDGFVLALKEYLQELHTPHHCNRLILPGSAGGIPERVVCAECGRQMEKYFMYRCCVE 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1317 585 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 1 584 IPR039299 GO:0010088
Sto3g1317 585 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 1 584 - -
Sto3g1317 585 Pfam Sieve element occlusion N-terminus 1 192 IPR027942 -
Sto3g1317 585 Pfam Sieve element occlusion C-terminus 353 583 IPR027944 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1317 Sto-Chr3 9568989 9571568 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1317 - - pvu:PHAVU_009G171300g 948.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1317 3 9568989 9571568 Sto3g1317 3 9568989 9571568 ECH
Sto3g1317 3 9568989 9571568 Sto12g0713 12 4517046 4520875 ECH