Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1306 ATGAAACGGTTCTTTAAGCCCGTCGAGAAGGATGGGCCTTCGAAGAAACCTTCTCTTTCGCTTTCCACAGAAGACGGTGAAACTACTGAAACATCTGGGGAGGAGAAGAAAGAGCCATTGAAGTTCTTGACTTGGAATGCTAATAGTCTTTTACTAAGAGTGAAGAACAATTGGGCGGAATTCACCAAGTTCGTCACCAGTTTTGATCCTGATGTCATTGCCATACAGGAAGTGAGGATGCCTGCTGCTGGTTCAAAGGGTGCACCTAAAAATCCTGGGGAACTGAAAGATGATACGAGCTCCTCCAGGGAAGAAAAGCAGATATTAATGCGTGCACTTTCAAGTCCACCTTTTGGAAACTATCGTGTTTGGTGGTCTCTTGCAGATTCAAAATATGCAGGGACAGCACTCCTTGTGAAAAAGTGCTTCAAGCCAAAAAGTGTCCTTTTCAATCTTGATAGAAaagCATCAAAGCATGAACCAGATGGCCGAGTAATCTTGGCTGAATTTGAGACTCTTCGTATATTGAATACATATGTACCAAACAATGGATGGAAAGAGGAGGAGAATTCATTTCAAAGGAGAAGAAAATGGGACAAAAGAATTATGGAATTTGTTATGCAATATTCTGAAAAGCCTTTGATATGGTGTGGGGATCTAAATGTCAGCCATGAAGAGGTTGACGTGAGTCATCCGGAATTTTTTAGTGCAGCAAAACTCAATGGCTATGTTCCTCCAAATAATGAGGACTGTGGACAGCCCGGATTTACCTTGTCTGAAAGAAAACGATTTGCCACTATCTTAAGAGAGGGGAAGCTGGTAGATGCCTACAGATTTCTTCACAAGGATAAGGACATGGAGCGAGGTTTCTCATGGTCTGGAAATCCAGTTGGAAAGTATCGAGGGAAAAGGATGAGAATAGACTATTTCATAGTTTcagaaaaaatgaaagataggATTGTTGCATGCGAGATGCAAGGACGGGGGATAGAGTTAGAAGGTTTCCATGGAAGTGATCATTGCCCAGTTACCCTAGAGCTCTCCTCAAGCTCCAACTCCCAAAACGAGGATCCGACTTAG 1080 0.4194 MKRFFKPVEKDGPSKKPSLSLSTEDGETTETSGEEKKEPLKFLTWNANSLLLRVKNNWAEFTKFVTSFDPDVIAIQEVRMPAAGSKGAPKNPGELKDDTSSSREEKQILMRALSSPPFGNYRVWWSLADSKYAGTALLVKKCFKPKSVLFNLDRKASKHEPDGRVILAEFETLRILNTYVPNNGWKEEENSFQRRRKWDKRIMEFVMQYSEKPLIWCGDLNVSHEEVDVSHPEFFSAAKLNGYVPPNNEDCGQPGFTLSERKRFATILREGKLVDAYRFLHKDKDMERGFSWSGNPVGKYRGKRMRIDYFIVSEKMKDRIVACEMQGRGIELEGFHGSDHCPVTLELSSSSNSQNEDPT 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1306 359 PANTHER AP ENDONUCLEASE 28 351 IPR004808 GO:0004518|GO:0006281
Sto3g1306 359 Gene3D Endonuclease/exonuclease/phosphatase 8 349 IPR036691 -
Sto3g1306 359 CDD Ape1-like_AP-endo 40 347 - -
Sto3g1306 359 MobiDBLite consensus disorder prediction 1 37 - -
Sto3g1306 359 MobiDBLite consensus disorder prediction 83 102 - -
Sto3g1306 359 SUPERFAMILY DNase I-like 40 347 IPR036691 -
Sto3g1306 359 PANTHER DNA-(APURINIC OR APYRIMIDINIC SITE) LYASE 28 351 - -
Sto3g1306 359 ProSiteProfiles AP endonucleases family 1 profile. 40 349 IPR004808 GO:0004518|GO:0006281
Sto3g1306 359 Pfam Endonuclease/Exonuclease/phosphatase family 43 340 IPR005135 GO:0003824
Sto3g1306 359 TIGRFAM xth: exodeoxyribonuclease III (xth) 40 347 IPR004808 GO:0004518|GO:0006281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1306 - - jre:108994699 612.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1306 3 9481461 9487054 Sto3g1306 3 9481461 9487054 ECH