Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1297 atggaaggagaagaagggacTCAACAACCACAGCTTGTACTCGCTCACAAGCTCTTCCTTCTCAGACACGGTGATGTTCAGGACATCGAGAAGGTCCGTCTCAAAGATGAGGTTTTTACTTTTGTCAAAGAAAACGATATGGTCCCTTTGTACGAAGCCCTAGTCGCTGATTCGATACTGGACATGGATCGAAGCGTTTTGGACTCGATGCGTGTTAAAATAGACGAGGAGCTCAAGAAGCTTGACGAAAATGTGATTGGAATTGTTCTAAATATTTTTGTGAAAGCTACAGCTGCACTTGCCCCTACGATTGCTGATGCCGAGGAAAACTTAGGTGAGAGTGAAGTTCGAGAGGCTCACTTGGCAAAATCCTTGTTCTTCATCCGGATTGGTGACAAGGAGAAAGCTTTGGAACATCTCAAGGTAACAGAAGGCAAGACAGTTGCAGTTGGTCAGAAGATGGATCTGGTGTTCTATACCTTGCAGCTCGGTTTTTTTGACATGGATTTTGATCTCATTTCTAAAAGCATTGACAAAGCCAAAAACTTGTTTGAGGAAGGTGGTGATTGGGAAAGAAAGAATAGGCTGAAAGTGTATGAAGGCCTGTACTGCATGTCTACTCGAAATTTCAAGAAGGCTGCCAAGTTATTTTTGGATTCTATCTCAACCTTTACAACTTATGAACTTTTTCCCTATGACACCTTTATATTTTACACAGTTTTGACAAGCATTATATCATTGGATAGAGTTTCCCTGAAGCAAAAGGTAGTGGATGCTCCTGAGATCTTGACTGTGATTGGCAAAATCCCATATCTTTCAGAGTTCTTAAACTCACTATATGATTGTCAGTACAAGTCATTTTTCTCTGCGTTTGCTGGCCTGACGGAGCAAATCAAGTTGGACCGCTATTTGCATCCACATTTCCGATATTACATGAGAGAGGTCAGAACTGTTGTTTATTCCCAGTTTTTGGAGTCTTACAAGAGTGTTACAATTGAGGCAATGGCAAAAGCATTTGGAGTGACCGTGGATTTCATTGATCTGGAGCTATCACGATTTATTGCAGCTGGGAAACTTCATTGCAAGATAGATAAAGTTGCAGGCGTACTTGAAACTAACCGCCCTGATGCTAAGAATGCCCTTTATCAAGCAACTATCAAGCAAGGGGACTTCCTATTGAACCGGATCCAGAAGTTGTCCCGTGTTATTGATCTTTGA 1218 0.4097 MEGEEGTQQPQLVLAHKLFLLRHGDVQDIEKVRLKDEVFTFVKENDMVPLYEALVADSILDMDRSVLDSMRVKIDEELKKLDENVIGIVLNIFVKATAALAPTIADAEENLGESEVREAHLAKSLFFIRIGDKEKALEHLKVTEGKTVAVGQKMDLVFYTLQLGFFDMDFDLISKSIDKAKNLFEEGGDWERKNRLKVYEGLYCMSTRNFKKAAKLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDAPEILTVIGKIPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVVYSQFLESYKSVTIEAMAKAFGVTVDFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDAKNALYQATIKQGDFLLNRIQKLSRVIDL 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1297 405 Gene3D - 9 356 - -
Sto3g1297 405 PANTHER 26S PROTESOME SUBUNIT 6 3 405 IPR019585 -
Sto3g1297 405 SMART PINT_4 306 389 IPR000717 -
Sto3g1297 405 SUPERFAMILY "Winged helix" DNA-binding domain 301 382 IPR036390 -
Sto3g1297 405 PANTHER BNAC08G11800D PROTEIN 3 405 - -
Sto3g1297 405 Pfam 26S proteasome subunit RPN7 96 255 IPR045135 -
Sto3g1297 405 Pfam PCI domain 273 373 IPR000717 -
Sto3g1297 405 ProSiteProfiles PCI domain profile. 209 377 IPR000717 -
Sto3g1297 405 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 306 389 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1297 K03037 - gmx:100810692 703.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1297 3 9385174 9388954 Sto3g1297 3 9385174 9388954 ECH