Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1296 CTGCCTCGCCTCGATGTTAACGATATCAAGGATAGGCTCTCTTCCCATTTCAGGCCTTGGCAACGCTCCTATCAATTCTGGGTTCGAGCCATTGATATCTACACTGGATACAAGGTTTTCCAAGTTAGAGTGAGTTTCGAGAAGGATGTGCTCAAGCAGGAAGCATTGTGGGATAGACAGCATGAGCTTGCTGCGGAGAAGATATACGCTATGTGCTCCGACCTTGGAGGTTTCTTCCTTAAGATCGCCCAAATTATAGGGAAGCCTGACTTGGCGCCAGCAGCATGGGTGAGAAGACTTGTTACCCTATGTGATCAGGCTCCTGCAACCCCGTTTCACACTGTTAAATTAGTATTGGAGAAGGAGCTGGGTAGGAGTATTGATGATGTGTTTGAAGTATTTGATGTGGAACCTCTTGGATCTGCTTCAATTGCTCAGGTACATAGAGCAAAACTAAGAGGCAATAAGAATTATGTTGTTGTCAAGGTTCAACATCCTGGAGTTCAGGATCTTATGATGACTGACATTCATAACTTGCAAGCTTTCGCTTTGTATATGCAAAAGACTGATATCAAATTTGATCTATATTCAGTGACAAAGGAAATGGAAAAACAGATTGGATATGAATTTGACTTCGTGAGGGAGGCTGGTGCTATGGAAAGGATTAGAAAATTTTTATACGAAAACAATAAAAGGACTCCTGTTCAGGTGCCACGAGTAATACAAGATATGGTTACTAGGAGAGTCTTAGTTATGGAATATATTGATGGGATTCCACTTATGAATCTTGGTGATGAAATAGCAAAAAGAGGCATAAATCCTCGTGGTAAGATGGCAGCAGCAGCAAAGCAGAAAATTCTTCAAAGTTTGACTCTAGCATATGGTCAAATGATTTTGAAAAGTGGATTCTTCCATGCAGATCCTCATCCAGGAAACATCCTGATTTGTAAAGGCTCAGAGGTTGCCTTGCTGGACTATGGACAGGTGAAGGATCTCCCTGAAAAACTGAAGCTTGGTTATGCTAATCTTGTTCTTGCAATTGCTGATGGTGACCCTATAAGGGCATCAGAGAGCTATAGGGAGCTCGGTATAGATACATTGAGCAAATGTGAAAATGAGCTACAGGAATTGTTTAAACTGGCACAGACAATGTTTGATACCAAACTGCCCCCTGGAGTGGCGATGCTGCAACCTTTCTCAGAAGACTCTTCTATTAAGAAAGTTGCTGTTCAGGcttttccagaagaattgtttTCTGTACTTCGGACAGTACATCTACTGAGGGGACTTAGTGTTGGTCTTGGAATCAATTATTCTTGTGCTGAGCAGTGGAGACCCATTGCTGAAGAAGTTTTGTATCAAGCTGGCAGACTTAAAGGTAAGAATGTTAAGCCTAGAGGCCGCAATCGAGGTTTTGTAAAAAGATTATTTTGGAGAGACTAA 1443 0.4144 LPRLDVNDIKDRLSSHFRPWQRSYQFWVRAIDIYTGYKVFQVRVSFEKDVLKQEALWDRQHELAAEKIYAMCSDLGGFFLKIAQIIGKPDLAPAAWVRRLVTLCDQAPATPFHTVKLVLEKELGRSIDDVFEVFDVEPLGSASIAQVHRAKLRGNKNYVVVKVQHPGVQDLMMTDIHNLQAFALYMQKTDIKFDLYSVTKEMEKQIGYEFDFVREAGAMERIRKFLYENNKRTPVQVPRVIQDMVTRRVLVMEYIDGIPLMNLGDEIAKRGINPRGKMAAAAKQKILQSLTLAYGQMILKSGFFHADPHPGNILICKGSEVALLDYGQVKDLPEKLKLGYANLVLAIADGDPIRASESYRELGIDTLSKCENELQELFKLAQTMFDTKLPPGVAMLQPFSEDSSIKKVAVQAFPEELFSVLRTVHLLRGLSVGLGINYSCAEQWRPIAEEVLYQAGRLKGKNVKPRGRNRGFVKRLFWRD 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1296 480 SMART serkin_6 133 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g1296 480 ProSiteProfiles Protein kinase domain profile. 133 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g1296 480 Pfam ABC1 atypical kinase-like domain 103 353 IPR004147 -
Sto3g1296 480 PANTHER ABC1 FAMILY PROTEIN 8 469 - -
Sto3g1296 480 Gene3D Transferase(Phosphotransferase) domain 1 126 342 - -
Sto3g1296 480 PANTHER - 8 469 - -
Sto3g1296 480 CDD ABC1_ADCK3-like 103 352 - -
Sto3g1296 480 SUPERFAMILY Protein kinase-like (PK-like) 106 328 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1296 Sto-Chr3 9377103 9382607 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1296 K08869 - jre:108981385 820.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1296 3 9377103 9382607 Sto3g1296 3 9377103 9382607 ECH