Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0858 ATGGGTGTTTTCAATTTCGAATACGAGAGCAGCAGTAGCATTGCTCCATCTAGGCTATTCAAGGCACTTGTTATTGACGCAGATAATGTGATCCCCAAGGTTGTACCAAACGCCATTCAGAGTACTGAAATCGTTGAAGGAGATGGTACTGGCGTTGGAACCATCAAGAAAATTACCTTTGGCCCAGGTAGCCCGGTGAAGAATGTGACGCACAAAGTGGAGGCATTGGACAGGGAGAAGTTCATATACAGCTACAGTGTGATCGAGGGAGATGCATTATCAGACAAGTACGAGAAAATAACGTACGAGACAAAGTTGGTGGCGAGTGAGAATGGAGGATGTGTGATAAAAGGTGAGAGCAAGTACGTGACGAAGGGTGAGAAAGAGGTGAATGAGGAGGATGTAAAGGCTAACAAAGACAAGGCCGCTTGGCTCCTTAAGGCCGTTGAAGCCTACCTTTTGGCAAATCCAGATGCCTATAGCCACTAA 489 0.4622 MGVFNFEYESSSSIAPSRLFKALVIDADNVIPKVVPNAIQSTEIVEGDGTGVGTIKKITFGPGSPVKNVTHKVEALDREKFIYSYSVIEGDALSDKYEKITYETKLVASENGGCVIKGESKYVTKGEKEVNEEDVKANKDKAAWLLKAVEAYLLANPDAYSH 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0858 162 PANTHER ALLERGEN PRU AV, PUTATIVE-RELATED 2 160 - -
Sto3g0858 162 CDD Bet_v1-like 4 153 - -
Sto3g0858 162 PANTHER - 2 160 - -
Sto3g0858 162 SUPERFAMILY Bet v1-like 2 159 - -
Sto3g0858 162 PRINTS Major pollen allergen Bet V1 signature 3 23 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Sto3g0858 162 PRINTS Major pollen allergen Bet V1 signature 26 36 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Sto3g0858 162 PRINTS Major pollen allergen Bet V1 signature 51 60 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Sto3g0858 162 PRINTS Major pollen allergen Bet V1 signature 67 86 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Sto3g0858 162 PRINTS Major pollen allergen Bet V1 signature 86 99 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Sto3g0858 162 PRINTS Major pollen allergen Bet V1 signature 111 127 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Sto3g0858 162 PRINTS Major pollen allergen Bet V1 signature 145 155 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Sto3g0858 162 ProSitePatterns Pathogenesis-related proteins Bet v I family signature. 90 122 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Sto3g0858 162 Pfam Pathogenesis-related protein Bet v 1 family 1 156 IPR000916 GO:0006952
Sto3g0858 162 Gene3D - 1 161 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0858 Sto-Chr3 5941384 5941959 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0858 - - fve:101300900 208.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0858 3 5941384 5941959 Sto3g0858 3 5941384 5941959 ECH