Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0856 ATGGGTATATTGTCTTCCATTGGATCTACAGTTCAGGGAAACTTTTTGAAAGGGAACTCTGGCATGTTAAGATTATTCCATTCGAGCGGCTCTAAACTTAGGTTACCTGGATCCAACGTTAACGAGTCTTACTGTGGAGCTTTTAGCACGACATGCACTTCACAGTGTATAGCAGCTGCAGCTGAATGTAGAACCAGAGGTGTTACTGTCACATGCAGGAAAACAAGTAGCAAGAGCCAAGAATTCTTGTATTCAGCGGATGATGAGTCAAGTTTTCTAACTTGTTCACCATCTCGCAATTCAAAGCGCATATTGGAATTTGATGCCAAAGAGGAGATTCTTACAAATCAAGAACCAAAGCATAATGTTAAAGTGTTTGTTTTTGATCTTGAAACCACTGGATTTGACAGAAAGAAAGAACGCATAGTTGAAATTGCAATTCGAGATCTTCAGGGGGGCAGGAACAGTTGTTTCCAAACCCTGGTTAACCCTGAACGGGCTGTTCCAAATTCTCATATTCATGGTATAACTACTGAGATGGTGAACCGACCAGAAGTTCCAAGGATGAAGGAGCTGATTCCCATTCTGTTGAGGTATATCAAAAGCCGCCAAATAGCTGGAGGGCCTGTTTTGTTGGTTGCTCACAATGCACGTACCTTTGATCTGCCATTCTTGATAGAGGAATTCAGGCGCTGCTCATATGAGCTTCCTCCAGACATATCATGTCTAGACACGAAGCCCCTAGCTCGTGAGGCAATGAAATTAAGAGATCCAAAATTTTCTGGGAGACTGACACTGTTAGCACTTTGTGAATACTATGGATTTCCAGTAGTAGGTACACGTCATAGGGCCATGTCAGATGTGAACATGCTGTGTGATGTATTTGGGAGGATAACTTTTGACTTGAAGCTAACGGCGGGTGAGCTTTTGGAAAGAGCTATTAGACCCTCCCATGTAATTAACAACACTCGAAGCTAG 978 0.4264 MGILSSIGSTVQGNFLKGNSGMLRLFHSSGSKLRLPGSNVNESYCGAFSTTCTSQCIAAAAECRTRGVTVTCRKTSSKSQEFLYSADDESSFLTCSPSRNSKRILEFDAKEEILTNQEPKHNVKVFVFDLETTGFDRKKERIVEIAIRDLQGGRNSCFQTLVNPERAVPNSHIHGITTEMVNRPEVPRMKELIPILLRYIKSRQIAGGPVLLVAHNARTFDLPFLIEEFRRCSYELPPDISCLDTKPLAREAMKLRDPKFSGRLTLLALCEYYGFPVVGTRHRAMSDVNMLCDVFGRITFDLKLTAGELLERAIRPSHVINNTRS 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0856 325 Gene3D - 125 305 IPR036397 GO:0003676
Sto3g0856 325 SUPERFAMILY Ribonuclease H-like 122 304 IPR012337 -
Sto3g0856 325 PANTHER THREE PRIME REPAIR EXONUCLEASE 1, 2 20 319 IPR040393 GO:0008408
Sto3g0856 325 PANTHER POLYMERASE III POLC-TYPE, PUTATIVE ISOFORM 1-RELATED 20 319 - -
Sto3g0856 325 CDD DEDDh 127 295 - -
Sto3g0856 325 Pfam Exonuclease 127 295 IPR013520 -
Sto3g0856 325 SMART exoiiiendus 124 304 IPR013520 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0856 Sto-Chr3 5932048 5933967 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0856 - - tcc:18603587 254.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0856 3 5932048 5933967 Sto3g0856 3 5932048 5933967 ECH