Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0838 ATGACGAGAGGGTTCAAATTCTGCAGGACGCACGTGCCCATTCACGTGAGGGTGCAAGACCTCATCCAACGCCTCACATTGCAGGAGAAGATTCGTCTTGTGGTTAATAATGCCATTGCCGTGCCCAGGCTTGGCATTCAGGGATACGAGTGGTGGTCCGAGGCACTTCACGGCGTCTCCAATGTGGGCCCCGGCACTAAGTTCGGTGGGGCCTTCCCCGCCGCCACTAGCTTCCCTCAAGTCATCTCCACCGCTGCTTCCTTCAATCAATCCCTCTGGCTCCAAATCGGACGGGTAGTGTCTGATGAAGCAAGAGCAATGTACAATGGAGGAATGGCTGGTTTAACATACTGGAGCCCTAACGTGAATATATTCCGTGACCCACGGTGGGGCCGAGGCCAAGAAACTCCCGGCGAGGACCCTACTTTGGCCGGGAAATACGCCGCCAACTATGTCCGGGGACTTCAAGGTGAGGGCCAGGGCAACAGGTTGAAGGTTGCTGCTTGTTGCAAACACTACACTGCCTATGATCTTGATAACTGGAAAGGCATAGACCGTTTCCATTTCAATGCTAGGGTAAGCAAGCAAGACCTGGCAGACACATACGACGTGCCGTTTAAGGCATGTGTGGTGGATGGAGGAGTGGCTAGTGTCATGTGCTCCTACAATCAAGTAAATGGAAAGCCCACTTGCGCTGATCCTGATCTCCTCAAAAACACCATCCGTGGCCAATGGCGTCTCAATGGGTACATAGTCTCTGATTGCGATTCAGTTGGGGTTCTCTACGACAATCAACACTACACAAAAACGCCAGAGGAAGCAGCTGCAGATACCATTAAAGCAGGCTTGGATTTGGACTGTGGGCCTTTCTTGGCAATTCACACAGAGAACGCCATAAGGAAAGGCCTTCTCACTGAGAATGATCTTAACCTTGCCTTGGCTAATCTTTTTACAGTCCAAATGAGATTGGGCATGTTCGATGGTGAACCCTCGGCCCAACCATACGGAAACTTGGGCCCAAGAGATGTCTGTACCCCGGCCCATCAACAACTCGCCCTCGAAGCCGCACGACAGGGCATAGTTCTCCTACAAAATAAAGGAAACTCACTGCCTCTATCCCCTGTGCGTCACCGCACGGTGGCAGTCATTGGACCCAATTCTGACGTCACTGTGACTATGATTGGAAACTACGCTGGAGTGGCATGTGGATATACGACGCCGTTGCAAGGGATAGCGAGATATGTGAAGACGGTTCATCAAGCAGGATGTAGGGATATTGCATGCCAAGGAAACCAGCTATTTGGATCCGCAGAGATAGCAGCAAGGCATGCGGATGCCACAGTGTTAGTAATGGGCCTGGACCAATCCATAGAAGCTGAATTCAGGGACAGAGTTGGGCTTCTCTTACCGGGCCTCCAACAAGAGCTTGTATCAAGGGTAGCCCGGGCCTCCAAAGGCCCAGTTGTGTTGGTCCTCATGTGTGGCGGCCCAGTTGATGTCACATTCGCAAAGAATGATCCCAAAATTAGTGCCATTTTATGGGTGGGATATCCTGGTCAAGCTGGAGGAACCGCCATAGCTGATGCCCTCTTCGGCACAATTAACCCAGGTGGAAGGCTACCCATGACATGGTACCCAGAAGAGTATGTAGCAAAATTGCCCATGACAAGTATGGACATGAGGCCCAACGCAGCAAGTGGGTACCCAGGTAGGACGTACAGATTCTACAAAGGCCCAGTAGTGTTCCCCTTTGGGCATGGGCTAAGTTACAGTAGATTCACCCACACACTAGCCCTCTCTTCTCCCAAACAAGTCTCTATTATTCCTATGGCTACCCTCTTGAGGAACTCAAGCAGCATCTCAAGCAACGCGGTGCGGGTGAGCCACGCCAATTGCGAGGCACTAGAATTGGGACTTCACGTGGACGTGAGGAACGAAGGGTCAATGGATGGGACCCACACGTTGCTGGTGTTCTCGAAGCCGCCTTCGGGAAAATGGTCAGTGAATAAGCAATTGGTGGGGTTCCACAAGACCCACGTGGCTGCTGGGTCGAAGCAGCGAGTGGTGGTTGGGGTTCACGTGTGTGAGCATCTTAGCGTTGTGGATGAGTTTGGGATTCGAAGAATCCCAATGGGCGAACACGAGCTTCACATTGGTGATCTCAAGCACTCCATTTCTGTTCAAACATTGCAAGAAATCAAATCCTGA 2208 0.5172 MTRGFKFCRTHVPIHVRVQDLIQRLTLQEKIRLVVNNAIAVPRLGIQGYEWWSEALHGVSNVGPGTKFGGAFPAATSFPQVISTAASFNQSLWLQIGRVVSDEARAMYNGGMAGLTYWSPNVNIFRDPRWGRGQETPGEDPTLAGKYAANYVRGLQGEGQGNRLKVAACCKHYTAYDLDNWKGIDRFHFNARVSKQDLADTYDVPFKACVVDGGVASVMCSYNQVNGKPTCADPDLLKNTIRGQWRLNGYIVSDCDSVGVLYDNQHYTKTPEEAAADTIKAGLDLDCGPFLAIHTENAIRKGLLTENDLNLALANLFTVQMRLGMFDGEPSAQPYGNLGPRDVCTPAHQQLALEAARQGIVLLQNKGNSLPLSPVRHRTVAVIGPNSDVTVTMIGNYAGVACGYTTPLQGIARYVKTVHQAGCRDIACQGNQLFGSAEIAARHADATVLVMGLDQSIEAEFRDRVGLLLPGLQQELVSRVARASKGPVVLVLMCGGPVDVTFAKNDPKISAILWVGYPGQAGGTAIADALFGTINPGGRLPMTWYPEEYVAKLPMTSMDMRPNAASGYPGRTYRFYKGPVVFPFGHGLSYSRFTHTLALSSPKQVSIIPMATLLRNSSSISSNAVRVSHANCEALELGLHVDVRNEGSMDGTHTLLVFSKPPSGKWSVNKQLVGFHKTHVAAGSKQRVVVGVHVCEHLSVVDEFGIRRIPMGEHELHIGDLKHSISVQTLQEIKS 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0838 735 Pfam Glycosyl hydrolase family 3 C-terminal domain 360 590 IPR002772 GO:0004553|GO:0005975
Sto3g0838 735 Pfam Fibronectin type III-like domain 656 720 IPR026891 -
Sto3g0838 735 Gene3D Immunoglobulins 616 734 IPR013783 -
Sto3g0838 735 PANTHER SUGAR HYDROLASE-RELATED 1 729 IPR044993 GO:0009044|GO:0045493
Sto3g0838 735 Gene3D - 346 591 IPR036881 GO:0004553|GO:0005975
Sto3g0838 735 PRINTS Glycosyl hydrolase family 3 signature 78 97 IPR001764 GO:0004553|GO:0005975
Sto3g0838 735 PRINTS Glycosyl hydrolase family 3 signature 166 182 IPR001764 GO:0004553|GO:0005975
Sto3g0838 735 PRINTS Glycosyl hydrolase family 3 signature 240 258 IPR001764 GO:0004553|GO:0005975
Sto3g0838 735 SUPERFAMILY (Trans)glycosidases 6 359 IPR017853 -
Sto3g0838 735 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 360 593 IPR036881 GO:0004553|GO:0005975
Sto3g0838 735 Pfam Glycosyl hydrolase family 3 N terminal domain 72 307 IPR001764 GO:0004553|GO:0005975
Sto3g0838 735 PANTHER BETA-D-XYLOSIDASE 1 1 729 - -
Sto3g0838 735 Gene3D - 17 334 IPR036962 GO:0004553|GO:0005975
Sto3g0838 735 SMART Fn3_like_2 653 722 IPR026891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0838 Sto-Chr3 5820749 5825519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0838 1 728 Glycoside Hydrolase AT5G49360 74.321 0.0 1127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0838 - - gmx:100805839 1289.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0838 3 5820749 5825519 Sto3g0838 3 5820749 5825519 ECH