Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0837 ATGGCAGGAGCTGTGGTCAACACTATTAATATTCGACTGAATCCAGCGGCCATAGCTTTTCTTCTTGACCATTCAGCTGCCGCAGTTCTAATGGTGGATCAGGAGTTCTTTTCCTTGGCAGAAGAAGCTTTGAAAATCTGTTCTGAGAAAAACAGAAGTTTTAAGCCTCCAATTTTAATTGTCATCGGTGATGAAAATTGCGATCCTAAGGCACTCAAGTATGCTTTGGACAAAGGAGTCATTGAATATGAGAAATTTCTAGAAACTGGTGACCCTGAATTTGCATGGAAACCACCAGAAGATGAATGGCAGAGCATTGCTTTGGGTTATACATCTGGTACCACTGCTAGCCCTAAGGGTGTGGTATTACATCACAGAGGGGCATATATTATGTCGCTAAGTGGAGCTCTTATTTGGGGAATGAATGAAGGAGCTATCTATCTATGGACGCTACCCATGTTTCATTGCAATGGTTGGTGCTACACTTGGACGCTAGCAGCTCTTTGTGGGACAAACATATGCCTTCGCCAGGTTTCAGCTAAGGCGGTATATGAAGCCATTGCCAAGTATAAAGTAACTCATTTTTGTGCAGCACCAGTGGTACTCAACTCAATAGTTAATGCCCCACCTGAGGAAGCCATACTTCCTCTGCCACATATTGTACATGTGAATACAGCTGGGGCTGCTCCTCCTCCTTCTGTTCTTGCTGCCATGTCACAACGAGGATTTCGTGTCACTCACACTTATGGTCTCTCAGAAACCTACGGCCCCTCCACAGTATGTGTTTGGAAGCCTGAGTGGGAATCACTTCCTCCGGAAACCCAAGCCCGGCTCAACTCAAGGCAAGGCTTTCGCTACATCGGCTTGGAAGGCCTAGATGTGGTGGACCCAAAAACCATGCAACCTGTTCCTGCCAATGGAACTACCATTGGAGAGATTGTGATGCGGGGTAATGTTGTAATGAAAGGATACTTAAAGAACCCGAAAGCCAACCAAGAAACGTTTGCAAATGGATGGTTTCATTCTGGGGATCTTGCTGTGAAGCACCCAGATGGATACATAGAAATTAAAGACAGATCAAAGGACATCATCATCTCTGGGGCTGAAAACATCAGTAGTGTAGAAGTAGAGAACACACTGTACTCTCACCCTGCAATAATGGAGGCTTCAGTGGTTGCGAGGCCTGATGAGAAATGGGGTGAGTCTCCCTGTGCTTTTGTGACATTGAAGCCAGGGGTTGATAGTTCTAATGAACAGCGTCTTGCTGAGGATATTATTAAGTTCTGCAGAGAAAAGATGCCTGCTTATTGGGTACCCAAATCCGTTTTCTTTGGACCATTACCAAAGACAGCCACCGGGAAGATACAGAAGCATTTGCTGAGGACCAAGGCAAAGGAGATGGGGCCTGTCAAAATGAGCAAGTTGTGA 1428 0.4552 MAGAVVNTINIRLNPAAIAFLLDHSAAAVLMVDQEFFSLAEEALKICSEKNRSFKPPILIVIGDENCDPKALKYALDKGVIEYEKFLETGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVLHHRGAYIMSLSGALIWGMNEGAIYLWTLPMFHCNGWCYTWTLAALCGTNICLRQVSAKAVYEAIAKYKVTHFCAAPVVLNSIVNAPPEEAILPLPHIVHVNTAGAAPPPSVLAAMSQRGFRVTHTYGLSETYGPSTVCVWKPEWESLPPETQARLNSRQGFRYIGLEGLDVVDPKTMQPVPANGTTIGEIVMRGNVVMKGYLKNPKANQETFANGWFHSGDLAVKHPDGYIEIKDRSKDIIISGAENISSVEVENTLYSHPAIMEASVVARPDEKWGESPCAFVTLKPGVDSSNEQRLAEDIIKFCREKMPAYWVPKSVFFGPLPKTATGKIQKHLLRTKAKEMGPVKMSKL 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0837 475 Pfam AMP-binding enzyme 1 366 IPR000873 -
Sto3g0837 475 Gene3D - 362 469 IPR045851 -
Sto3g0837 475 PANTHER DEPENDENT LIGASE, PUTATIVE-RELATED 1 475 - -
Sto3g0837 475 SUPERFAMILY Acetyl-CoA synthetase-like 1 465 - -
Sto3g0837 475 CDD ttLC_FACS_AEE21_like 1 462 - -
Sto3g0837 475 Gene3D - 1 361 IPR042099 -
Sto3g0837 475 Pfam AMP-binding enzyme C-terminal domain 375 454 IPR025110 -
Sto3g0837 475 PANTHER ACYL-ACTIVATING ENZYME 1 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0837 Sto-Chr3 5808752 5810534 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0837 1 475 Miscellaneous Gene Families AT3G16910 75.210 0.0 773
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0837 K01913 - gmx:100808187 857.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0837 3 5808752 5810534 Sto3g0837 3 5808752 5810534 ECH