Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0825 ATGCAGTCATCTCTttcgctctctctctctaccaccTCCTCTGCTCCTACCATTTCCAGATCACACCACTCGCCCTCTCACTGCTTCCCTCTCACTAACAATGGAAGGCCTTTGAATCTCCGTTTCTGCGGTTTAAGGCGCGAGGCATTAGGATTCACTTCTCTCAAGCTCAGTGATTCGAATCAGAGAGTGCTGCTCCCTAGCCGCGGACACTTGAACAAAGTATCGGCTGCATTGTCTGACAATGGGAGTCCTCCTAAATCGTTCGATTACGATTTGTTGATTATTGGAGCTGGCGTTGGTGGTCACGGTGCGGCGCTTCATGCCGTTGAGAAGGGTTTGAAAACAGCCATTATTGAGGGAGATGTGGTGGGAGGAACTTGTGTAAACAGAGGCTGCGTCCCTTCTAAAGCTCTTTTGGCTGTAAGTGGCCGTATGCGTGAACTACAAAGTGATCATCACTTAAAGTCCTTGGGCTTACAGGTTTCTGCTGCCGGGTATGACAGGCAGGGAGTAGCTGATCATGCTAATAACCTTGCTTCAAAAATTCGTAGCAATTTGACCAATTCTTTAAAGGCACTTGGAGTAGACATACTTACAGGTTTTGGGACAATTTTGGGTCCTCAAAAGGTGCAAGTTGGTTCTTCCAACAACATTGTAACCGCAAAAGATATCATCATTGCCACTGGTTCTGTTCCTTTCGTTCCTAAGGGCATTGAAGTTGATGGGAAGACTGTGATTACCAGTGACCATGCACTCAAACTGGAGTCTGTTCCTGATTGGATAGCAATTGTTGGAAGTGGTTACATTGGCCTTGAATTCAGTGACGTGTATACTGCACTTGGAAGTGAGGTTACTTTCATTGAAGCTTTAGATCAGCTTATGCCTGGATTTGATCCTGAAATTAGCAAATTGGCTCAGAGGGTTCTAATAAATCCCCGGAGGATTGACTATCATACTGGAGTTTTTGCCTCCAAGATCACTCCTGCAAGGGATGGAAAACCAGTTGTCATTGAACTCATTGATGCAAAGACCAAGGAACCTAAGGAAAGTTTGGAGGTGGATGCTGCATTAATAGCAACTGGAAGGGCTCCATTCACACAAGGTCTTGGCTTGGAAAATATTGATGTTGTAACACAGCGTGGTTTTGTTCCAGTAGATGAGCGGATGCGAGTAATTGATGCAAAAGGCAATCTGGTCCCTCATTTGTATTGTATTGGTGATGCAAATGGCAAGATGATGCTTGCTCATGCTGCCAGTGCTCAAGGAATTTCAGTGGTTGAACAAGTCACTGGAAGAGATTATGTGCTCAATCATTTAAGTATTCCAGCTGCTTGTTTCACTCATCCTGAAATCAGCATGGTTGGATTGACAGAGCCTCAAGCAAGGGAGAAAGGTGAGAAAGAGGGATTTGAAGTAAGTGTTGCCAAAACAAGTTTTAAAGCTAACACAAAGGCCCTAGCAGAAAATGAAGGGGAGGGAATTGCCAAGTTGATATACAGGCCTGACAATGGGGAGATACTAGGAGTTCATATTTTTGGGCTGCATGCTGCAGATCTTATCCATGAAGCATCCAATGCAATAGCATTGGGGACACGCATTCAGGACATAAAATTCGCAGTTCATGCTCATCCAACTTTGTCTGAGGTGCTTGATGAGCTATTCAAATCAGCAAAGGTCAAAGCACAAGCTTCTAATCCAGTAAGTGAACCAGTTGCAGTCTAA 1725 0.44 MQSSLSLSLSTTSSAPTISRSHHSPSHCFPLTNNGRPLNLRFCGLRREALGFTSLKLSDSNQRVLLPSRGHLNKVSAALSDNGSPPKSFDYDLLIIGAGVGGHGAALHAVEKGLKTAIIEGDVVGGTCVNRGCVPSKALLAVSGRMRELQSDHHLKSLGLQVSAAGYDRQGVADHANNLASKIRSNLTNSLKALGVDILTGFGTILGPQKVQVGSSNNIVTAKDIIIATGSVPFVPKGIEVDGKTVITSDHALKLESVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEISKLAQRVLINPRRIDYHTGVFASKITPARDGKPVVIELIDAKTKEPKESLEVDAALIATGRAPFTQGLGLENIDVVTQRGFVPVDERMRVIDAKGNLVPHLYCIGDANGKMMLAHAASAQGISVVEQVTGRDYVLNHLSIPAACFTHPEISMVGLTEPQAREKGEKEGFEVSVAKTSFKANTKALAENEGEGIAKLIYRPDNGEILGVHIFGLHAADLIHEASNAIALGTRIQDIKFAVHAHPTLSEVLDELFKSAKVKAQASNPVSEPVAV 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0825 574 PANTHER DIHYDROLIPOAMIDE DEHYDROGENASE 20 566 - -
Sto3g0825 574 TIGRFAM lipoamide_DH: dihydrolipoyl dehydrogenase 91 561 IPR006258 GO:0004148|GO:0050660
Sto3g0825 574 Gene3D - 234 361 IPR036188 -
Sto3g0825 574 Gene3D - 441 565 IPR016156 GO:0016491|GO:0050660
Sto3g0825 574 PRINTS Pyridine nucleotide disulphide reductase class-I signature 92 114 - -
Sto3g0825 574 PRINTS Pyridine nucleotide disulphide reductase class-I signature 124 139 - -
Sto3g0825 574 PRINTS Pyridine nucleotide disulphide reductase class-I signature 225 234 - -
Sto3g0825 574 PRINTS Pyridine nucleotide disulphide reductase class-I signature 261 286 - -
Sto3g0825 574 PRINTS Pyridine nucleotide disulphide reductase class-I signature 355 369 - -
Sto3g0825 574 PRINTS Pyridine nucleotide disulphide reductase class-I signature 403 410 - -
Sto3g0825 574 PRINTS Pyridine nucleotide disulphide reductase class-I signature 438 459 - -
Sto3g0825 574 PRINTS Pyridine nucleotide disulphide reductase class-I signature 507 522 - -
Sto3g0825 574 PRINTS Pyridine nucleotide disulphide reductase class-I signature 529 549 - -
Sto3g0825 574 SUPERFAMILY FAD/NAD(P)-binding domain 78 432 IPR036188 -
Sto3g0825 574 Gene3D - 91 429 IPR036188 -
Sto3g0825 574 SUPERFAMILY FAD/NAD-linked reductases, dimerisation (C-terminal) domain 441 555 IPR016156 GO:0016491|GO:0050660
Sto3g0825 574 Pfam Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 442 553 IPR004099 GO:0045454
Sto3g0825 574 ProSitePatterns Pyridine nucleotide-disulphide oxidoreductases class-I active site. 125 135 IPR012999 GO:0016668
Sto3g0825 574 PIRSF Hg-II_reductase_MerA 63 557 IPR001100 GO:0016491
Sto3g0825 574 Pfam Pyridine nucleotide-disulphide oxidoreductase 91 423 IPR023753 GO:0016491
Sto3g0825 574 PRINTS FAD-dependent pyridine nucleotide reductase signature 93 112 - -
Sto3g0825 574 PRINTS FAD-dependent pyridine nucleotide reductase signature 222 240 - -
Sto3g0825 574 PRINTS FAD-dependent pyridine nucleotide reductase signature 261 279 - -
Sto3g0825 574 PRINTS FAD-dependent pyridine nucleotide reductase signature 354 370 - -
Sto3g0825 574 PRINTS FAD-dependent pyridine nucleotide reductase signature 388 410 - -
Sto3g0825 574 PANTHER DISULFIDE OXIDOREDUCTASE 20 566 - -
Sto3g0825 574 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0825 Sto-Chr3 5721419 5726393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0825 1 565 Acyl Lipid Metabolism Gene Families AT3G16950 83.158 0.0 928
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0825 K00382 - gmx:100809578 966.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0825 3 5721419 5726393 Sto3g0825 3 5721419 5726393 ECH