Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0813 ATGGCGGAGAAGTACAACCTCAAGAACCCGGCGGTGAAGCGGATTCTACAGGAGGTGAAGGAGATGCAATCAAATCCTTCCGATGATTTCATGAGCTTGCCTCTTGAGgaaaatatttttgaatGGCAATTTGCTATAAGAGGACCCTGTGATACTGAATTTGAGGGCGGAATTTATCATGGACGGATCCAGTTACCTGCAGAATATCCATTCAAACCTCCTTCATTTATGTTATTGACTCCTAATGGTCGTTTTGAGACCCAAACCAAGATTTGCTTGAGCATATCAAATCATCATCCTGAGCATTGGCAACCATCATGGAGCGTAAGGACTGCTTTAGTTGCATTGATTGCATTTATGCCCACCAACCCAAATGGTGCATTGGGCTCATTAGACTACAAGAAGGAAGAGAGGCGTGCATTGGCCATTAAATCTCGTGAAGCACCTCCAAGATGTGGAACTCCTGAACGTCAAAAACTGATTGATGAGATACACGAGTATATGCTAAGCAAAGCACCCCCTGTTCCTCAACAAAGCCTCTCACAGGATCCTGAAGAACACCCCAGAAATGAGGAGGCTGAAGCCCAAGTTAGTCCTCCAAATCCTGAGGCCATACCCGCTGGAGAGGGGCTTCCAGATGAAGCAGAAGTTGACAGAATTGTTGAAGAATCCCCAGCAAATGATAATGCCAACCCTGTAGGAGTGGAAGTTCCAAGAGAGATTCCAGCCAGTGCCTCCAGCAGCCAGCTACCCCGGCCACAAACGAGCGTTCAAAAACCTGATGATCGCTTGTTCACATTGGCTGCAATTGGACTTACTATAGCAATCATGGTCCTTTTGCTGAAGAAGTTCATTAAATCTATCGAACATGGTGCAGTTTTCATGGATGGATCGTAG 897 0.4548 MAEKYNLKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPCDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPNGALGSLDYKKEERRALAIKSREAPPRCGTPERQKLIDEIHEYMLSKAPPVPQQSLSQDPEEHPRNEEAEAQVSPPNPEAIPAGEGLPDEAEVDRIVEESPANDNANPVGVEVPREIPASASSSQLPRPQTSVQKPDDRLFTLAAIGLTIAIMVLLLKKFIKSIEHGAVFMDGS 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0813 298 PANTHER BNAC01G21910D PROTEIN 6 298 - -
Sto3g0813 298 Pfam Ubiquitin-conjugating enzyme 14 125 IPR000608 -
Sto3g0813 298 SMART ubc_7 13 173 - -
Sto3g0813 298 SUPERFAMILY UBC-like 11 133 IPR016135 -
Sto3g0813 298 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 6 298 - -
Sto3g0813 298 Gene3D Ubiquitin Conjugating Enzyme 2 181 IPR016135 -
Sto3g0813 298 CDD UBCc 12 147 IPR000608 -
Sto3g0813 298 MobiDBLite consensus disorder prediction 173 210 - -
Sto3g0813 298 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 10 173 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0813 Sto-Chr3 5645486 5648221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0813 3 296 Miscellaneous Gene Families AT3G17000 66.883 4.22e-136 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0813 K10578 - gmx:100798396 492.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0813 3 5645486 5648221 Sto3g0813 3 5645486 5648221 ECH