Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0804 ATGAAGAAGAAGGGCATTCGTGTGCCAGGAATAGGGCACAGGATCAAGAGTAGAGACAACAAAGATAAGAGAGTAGAGTTGCTACAGAAGTTTGCAAGAACGCATTTTCCTTCCGTAAAATACATGGAATATGCCGTTGAGGTTGAAACCTATACCCTCTCAAAGGCAAATAACCTGGTTCTCAACGTAGACGGTGCAATTGGGTCCCTTTTCTTGGATCTTCTTGCCGGTAGTGGAATGTTCACGAAGCAAGAGATTGATGAAATTGTGGAGATTGGTTATCTCAATGGGCTTTTTGTGCTTGCTCGCTCCATTGGCTTGATTGGGTGA 330 0.4394 MKKKGIRVPGIGHRIKSRDNKDKRVELLQKFARTHFPSVKYMEYAVEVETYTLSKANNLVLNVDGAIGSLFLDLLAGSGMFTKQEIDEIVEIGYLNGLFVLARSIGLIG 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0804 109 Pfam Citrate synthase, C-terminal domain 3 82 IPR002020 GO:0046912
Sto3g0804 109 Gene3D - 1 72 IPR016143 -
Sto3g0804 109 SUPERFAMILY Citrate synthase 1 109 IPR036969 GO:0046912
Sto3g0804 109 PANTHER ATP-CITRATE SYNTHASE BETA CHAIN PROTEIN 1 1 109 - -
Sto3g0804 109 PANTHER ATP-CITRATE SYNTHASE 1 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0804 Sto-Chr3 5587708 5588128 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0804 1 109 Acyl Lipid Metabolism Gene Families AT3G06650 94.495 3.00e-68 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0804 K01648 - gmx:100800904 211.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0804 3 5587708 5588128 Sto3g0804 3 5587708 5588128 ECH