Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0797 ATGGATAGATCCTTCATTGGGATAGTGTTTGGGGCATTGACAGTTTTGAGCTTGATTGGGACATGTACTTCGAACGACCCACCTGCAAATTTCGTGTTTGGGGATTCTCTTGTTGATGTGGGAAATAATAATTACATTGTTTCACTCACTAAGGCTAATTTCTTACCCAATGGTGAGGAATTGGGCATTGGTTTTACTCCACCATACATGGCTCCCACTACATCTGGGCCAGTGGTTTTGCGAGGTGTCAATTATGCTTCTGGTGGAAGTGGAATTCTCAACGTCACCGGAAGAATATTCGGTGGCCGAATCAACTTGGATGCACAGATAGATAATTTTGCTAATACAAGACATGACATAATCTCCACCATTGGTGATTCAGCGACTCAGAGCCTATTCAAAAGAGCAATATTTTCAGTCACAATTGGCTCCAATGATTTCATTAACAACTATTTGACACCAACCCTCACAATTTCCGAACAGAAATTGGGTTCTCCAGAGCTGTTTGTGGCCACCTTGATCACAAGATTCAGAGCTCAGCTACTGAGGCTAATCAGTCTTGGAGCTAGAAAACTGGTTGTGGCAAATGTGGGGCCTATTGGGTGCATACCAAACCAGAGAGACACGAACCCTGTTTTTGGAGATAGCTGCGTGAGTTTCCCGAATCAGATAGCACAGTTATTCAATGCCCAATTGAGAAGCCTGGTCTCAGAGCTTAGCCATAATCTGGAAGGTTCCATTCTGGTTTATGCTGACGTTTACCACATCCTAACCGATATACTCCAAAACTACAGAGCTTATGGTTTCGAGAACCCTTCGTCGTCGTGCTGTTCTATGGCCGGACGCTTCGGAGGTCTGATTCCGTGTGGTCCCACATCGAAAGTTTGCTGGGACAGATCCAAGTACGTGTTCTGGGACCCATATCATCCTACCGATGCCGCCAATTTCATCATCGCTAACCGCCTTTTGGATGGTGACGTTACGGATATTTCACCCCTCAATGTTCGCCAACTTGCTAATTCTTCTtga 1029 0.449 MDRSFIGIVFGALTVLSLIGTCTSNDPPANFVFGDSLVDVGNNNYIVSLTKANFLPNGEELGIGFTPPYMAPTTSGPVVLRGVNYASGGSGILNVTGRIFGGRINLDAQIDNFANTRHDIISTIGDSATQSLFKRAIFSVTIGSNDFINNYLTPTLTISEQKLGSPELFVATLITRFRAQLLRLISLGARKLVVANVGPIGCIPNQRDTNPVFGDSCVSFPNQIAQLFNAQLRSLVSELSHNLEGSILVYADVYHILTDILQNYRAYGFENPSSSCCSMAGRFGGLIPCGPTSKVCWDRSKYVFWDPYHPTDAANFIIANRLLDGDVTDISPLNVRQLANSS 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0797 342 CDD SGNH_plant_lipase_like 28 326 IPR035669 -
Sto3g0797 342 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE SUPERFAMILY PROTEIN 16 340 - -
Sto3g0797 342 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE-RELATED 16 340 - -
Sto3g0797 342 SUPERFAMILY SGNH hydrolase 31 324 - -
Sto3g0797 342 Pfam GDSL-like Lipase/Acylhydrolase 31 321 IPR001087 GO:0016788
Sto3g0797 342 Gene3D SGNH hydrolase 23 325 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0797 Sto-Chr3 5540973 5543203 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0797 28 341 Acyl Lipid Metabolism Gene Families AT4G10950 32.544 2.20e-59 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0797 - - gmx:100815323 488.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0797 3 5540973 5543203 Sto3g0797 3 5540973 5543203 ECH