Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0791 ATGTGTCCTTCCGGCCGATCCCTCTCTCGTCCCTCCTCCGCCGCCGCCCTCGACTCCTCTTTCAAACCTGCATTCGACGTTCTCGACGCCGATCGCGACGGAAAGATCAGCCGCGACGACCTCCGTATGTTCTACGCCCGGAAGGCCGCCGCCTCCTCCCTCGACGTTGACGACGACGTCATTAGGACGATGATGACGGTGGCCGACACCAACGCGGACGGGTTCGTGGAGTACGACGAGTTCGAGAGGGTGGTTCTCGGCGCGAAGAACGGATCGACGAGCTCGAGCCCTACGTCGTTCATGGAGGATGTGTTCAGAGTGATGGACAAGGACGGAGACGGCAAGCTCAGCCATCGGGATTTGAAGAGCTTCATGGAAATGGCGGGTCTCGCCGCCACCGACGAGGATATCGACGCTATGATCAAATTGGGCGGCGGCGATAAAAACGGCGGCGTTACGTTCGAAGGTTTGCATCGAATATTAATTAGCCGTTGA 495 0.5879 MCPSGRSLSRPSSAAALDSSFKPAFDVLDADRDGKISRDDLRMFYARKAAASSLDVDDDVIRTMMTVADTNADGFVEYDEFERVVLGAKNGSTSSSPTSFMEDVFRVMDKDGDGKLSHRDLKSFMEMAGLAATDEDIDAMIKLGGGDKNGGVTFEGLHRILISR 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0791 164 PANTHER CALCIUM BINDING PROTEIN 1 162 - -
Sto3g0791 164 CDD EFh 21 81 IPR002048 GO:0005509
Sto3g0791 164 SMART efh_1 100 128 IPR002048 GO:0005509
Sto3g0791 164 SMART efh_1 136 164 IPR002048 GO:0005509
Sto3g0791 164 SMART efh_1 20 48 IPR002048 GO:0005509
Sto3g0791 164 SMART efh_1 60 88 IPR002048 GO:0005509
Sto3g0791 164 ProSitePatterns EF-hand calcium-binding domain. 109 121 IPR018247 -
Sto3g0791 164 Gene3D - 7 86 - -
Sto3g0791 164 Gene3D - 87 163 - -
Sto3g0791 164 ProSitePatterns EF-hand calcium-binding domain. 29 41 IPR018247 -
Sto3g0791 164 ProSiteProfiles EF-hand calcium-binding domain profile. 24 51 IPR002048 GO:0005509
Sto3g0791 164 Pfam EF-hand domain pair 21 84 IPR002048 GO:0005509
Sto3g0791 164 PANTHER CALMODULIN-RELATED PROTEIN 97A-LIKE 1 162 - -
Sto3g0791 164 ProSiteProfiles EF-hand calcium-binding domain profile. 96 131 IPR002048 GO:0005509
Sto3g0791 164 ProSiteProfiles EF-hand calcium-binding domain profile. 56 91 IPR002048 GO:0005509
Sto3g0791 164 SUPERFAMILY EF-hand 19 162 IPR011992 -
Sto3g0791 164 Pfam EF hand 101 125 IPR002048 GO:0005509
Sto3g0791 164 ProSitePatterns EF-hand calcium-binding domain. 69 81 IPR018247 -
Sto3g0791 164 CDD EFh 102 155 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0791 Sto-Chr3 5507113 5507607 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0791 1 161 EF-hand Containing Proteins AT5G49480 52.469 5.18e-50 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0791 K02183 - tcc:18603671 184.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0791 3 5507113 5507607 Sto3g0791 3 5507113 5507607 ECH