Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0784 ATGGCGAAACACGAAGACCTTCCCAtcccgattttcaattcactgGAGCCTGTTTATGGCGGAGGCTCTCTTCTCGAAGAAGCGAAGCTtcgttttgaaaatttgaagtcCAAGTTCCAAAAAGTCTTCGGTCACCCTCCTCATGTCTTCGCTCGCTCTCCTGGGAGAGTGAACTTAATCGGGGAGCATATTGACTATGAGGGATATTCAGTGTTGCCTATGGCAATTCGACAGGATACGATCGTGGCAATTCGGACAAACGAAGCCGAAAATACTGTTAAAATTGCTAATGTGAATGATGCAAAACACACCATGTGTACTTATCCGGCTGATCCTGACCAGGTGGATCTTTACGCCCTTCCGTACAAAGGTTACTATGAATATGCAAAATCAAAAGGTGTGGATGTTAGTAAAAAAGTTGGACTGGAAGTTCTTGTTGATGGAACAGTTCCACAAGGTTCTGGACTATCAAGCTCTGCAGCATTTGTTTGTTCTTCTACAATTGCCATTATGGCTGCTTTTGGAGTAAACTTCCCAAAGAGTGGAGACAACGCGACTGCTCTTGCTAAATTCTTGCAAGCTGAACTATATGGTAAACCAATGGCATGCCTTAACATGATATCAGTATCATCTCTGAAAGAAATTGCACAAGTTACTTGTGAATGTGAAAGACACGTTGGAACACAATCTGGTGGAATGGATCAGGCAATCTCTGTCATGGCTAAATCTGGGTTTGCAGAGCTGATTGATTTTAACCCCATCCGTGCTACAGATGTGGAGCTTCCTGCTGGTGGGACTTTTGTAATAGCTCATTCTTTGGCAGAGTCTCAAAAGGCTGTAACTGCTGCTATAAACTATAATAATAGGGTTGTTGAATGTCGCTTAGCTTCTGTGTTTTGTCTTTTCTCTGTCAAAGTGTGTGGAAACTTATGGAAAGCTAGTTGTGTAGGCATAAAGCTGGGAATGAAGCCCCAAGAGGCAATATCAAAAGTGAATACCCTATCTGATGTTGAAGGGTTATGTGTAACATTTGCTGGTAAAAAGAATTCATCTGATCCTGTCCTTGCTGTCAAGGAATTTTTGAAGGAAGAGCCATATACAGTTGAAGAGATTGAGAAAATTACTGAGGAAAAGGTTACCTCATTTTTGGGCAATAATGCAGCTTATTTAGATGTCCTAAAAATTGCTAAGCACTACAAGTTACATCAGAGAGCTGCCCATGTGTACTCAGAAGCCAAGAGGGTACATGCATTCAAGGATATTGTATCATCAAAATTAAGTGAGGAGGAAACACTTAAAAAGCTTGGTGATCTTATGAATGAGAGTCATTATAGCTGCAGCGTATTATATGAATGCAGCTGTCCTGAGTTGGAAGAACTTGTAGGCATCTGTCGTCAGCATGGTGCCCTTGGGGCAAGGCTTACTGGGGCTGGATGGGGTGGGTGTGCAGTTGCTTTGGTGAAAGAGAGCATTGTCCCACAATTTATTCTGAATTTGAAGGAAAGTTATTACCAGTCTAGGATTGACAAAGGCACCATCAGCAAGAGTGAGCTTGGCCTTTATGTATTTGCTTCCAAGCCATCAAGTGGGGCCGCCATTTTCAAGTTTTAA 1611 0.4134 MAKHEDLPIPIFNSLEPVYGGGSLLEEAKLRFENLKSKFQKVFGHPPHVFARSPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRTNEAENTVKIANVNDAKHTMCTYPADPDQVDLYALPYKGYYEYAKSKGVDVSKKVGLEVLVDGTVPQGSGLSSSAAFVCSSTIAIMAAFGVNFPKSGDNATALAKFLQAELYGKPMACLNMISVSSLKEIAQVTCECERHVGTQSGGMDQAISVMAKSGFAELIDFNPIRATDVELPAGGTFVIAHSLAESQKAVTAAINYNNRVVECRLASVFCLFSVKVCGNLWKASCVGIKLGMKPQEAISKVNTLSDVEGLCVTFAGKKNSSDPVLAVKEFLKEEPYTVEEIEKITEEKVTSFLGNNAAYLDVLKIAKHYKLHQRAAHVYSEAKRVHAFKDIVSSKLSEEETLKKLGDLMNESHYSCSVLYECSCPELEELVGICRQHGALGARLTGAGWGGCAVALVKESIVPQFILNLKESYYQSRIDKGTISKSELGLYVFASKPSSGAAIFKF 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0784 536 SUPERFAMILY GHMP Kinase, C-terminal domain 266 511 IPR036554 -
Sto3g0784 536 PRINTS Mevalonate kinase family signature 53 77 - -
Sto3g0784 536 PRINTS Mevalonate kinase family signature 148 170 - -
Sto3g0784 536 PRINTS Mevalonate kinase family signature 471 488 - -
Sto3g0784 536 Pfam GHMP kinases C terminal 428 504 IPR013750 -
Sto3g0784 536 PANTHER MEVALONATE KINASE/GALACTOKINASE 212 535 - -
Sto3g0784 536 PANTHER MEVALONATE KINASE/GALACTOKINASE 1 181 - -
Sto3g0784 536 Gene3D - 285 447 - -
Sto3g0784 536 PANTHER BNAA01G32760D PROTEIN 1 181 - -
Sto3g0784 536 PANTHER BNAA01G32760D PROTEIN 212 535 - -
Sto3g0784 536 PIRSF Galactokinase 24 199 IPR006206 GO:0005524|GO:0005737|GO:0016301|GO:0016773
Sto3g0784 536 PIRSF Galactokinase 195 536 IPR006206 GO:0005524|GO:0005737|GO:0016301|GO:0016773
Sto3g0784 536 ProSitePatterns GHMP kinases putative ATP-binding domain. 150 161 IPR006203 GO:0005524
Sto3g0784 536 Pfam Galactokinase galactose-binding signature 38 85 IPR019539 -
Sto3g0784 536 Pfam GHMP kinases N terminal domain 144 240 IPR006204 GO:0005524
Sto3g0784 536 ProSitePatterns Galactokinase signature. 55 66 IPR019741 -
Sto3g0784 536 PRINTS Galactokinase signature 55 73 IPR000705 GO:0004335|GO:0005524|GO:0006012|GO:0046835
Sto3g0784 536 PRINTS Galactokinase signature 141 159 IPR000705 GO:0004335|GO:0005524|GO:0006012|GO:0046835
Sto3g0784 536 Gene3D - 23 272 IPR014721 -
Sto3g0784 536 Gene3D - 448 523 - -
Sto3g0784 536 SUPERFAMILY Ribosomal protein S5 domain 2-like 28 263 IPR020568 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0784 Sto-Chr3 5433160 5438033 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0784 K18674 - gmx:100796793 780.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0784 3 5433160 5438033 Sto3g0784 3 5433160 5438033 ECH