Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0781 ATGGCAAATTTGAAGTTCCTTCCTCTCCTCATAttttccatcatcttcttcttctccattcaatCTCATGCCTCTGAATCTCTCATCGAACAAACCTGCAAGAACACACCACACGAATCACTATGCCTTCAATACATGAAATCAGACCCTGGAAGCTCTCAGGCTGATGTGACGGGCCTTGCTCTAATAATGGTGGACGCCATTAAGGCCACGGCCCAACAGGCCCAAACCAAGATCCAACAAGAGCTTGAAAAGGGTCATGGCAGTGAAACTGAAAAGAGAGCCTTGAATTCGTGTGCAGAGCGATACAGAGCAGTTGTAGAAGGTGATGTTCCAGAAGCCATTGAAGCTCTGCAAAAAGGGGATCCCAAGTTTGCAGAACAAGGAGCTAATGATGCTGCTTTGGAGGCTACTTCATGTGAGACTTCATTCTCTTCTGGAAAATCGCCTCTCACACAGCAGAACAATGCTGTGCATGATGTTGCACAAGTTGCTGCAGCTATTGTCACAAACTTGCTTTAG 522 0.4387 MANLKFLPLLIFSIIFFFSIQSHASESLIEQTCKNTPHESLCLQYMKSDPGSSQADVTGLALIMVDAIKATAQQAQTKIQQELEKGHGSETEKRALNSCAERYRAVVEGDVPEAIEALQKGDPKFAEQGANDAALEATSCETSFSSGKSPLTQQNNAVHDVAQVAAAIVTNLL 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0781 173 Coils Coil 65 85 - -
Sto3g0781 173 Pfam Plant invertase/pectin methylesterase inhibitor 27 168 IPR006501 GO:0004857
Sto3g0781 173 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 19 172 - -
Sto3g0781 173 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 26 172 IPR035513 -
Sto3g0781 173 TIGRFAM PME_inhib: pectinesterase inhibitor domain 4 172 IPR006501 GO:0004857
Sto3g0781 173 SMART PMEI_2 24 168 IPR006501 GO:0004857
Sto3g0781 173 Gene3D Invertase/pectin methylesterase inhibitor family protein 24 173 IPR035513 -
Sto3g0781 173 CDD CIF_like 26 172 IPR034087 GO:0004857|GO:0043086
Sto3g0781 173 PANTHER PECTINESTERASE INHIBITOR-LIKE 19 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0781 Sto-Chr3 5414159 5414680 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0781 - - gmx:100306719 182.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0781 3 5414159 5414680 Sto3g0781 3 5414159 5414680 ECH