Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0780 atggcAAATTTGAAGCTCCTCCCTCCCATCATCTTCTTCGTCATCTTCCTCTCCATTCAATCCCATCGTGCTTCTTGTGCATCTCTCATTGAGCAAACCTGCAAGAACACACCACATGAAGCACTCTGCCTTCAATACCTGAAATCAGACCCCGGAAGCTCTCAGGCTGATATAACGGGCCTTGCACTAATAATGGTGGACGCCATGAAGACCACGACCCAACAGGCCCAAGCCAAAGTCCAGCAAGAGCTTAAAAAGGGCCATGGTGAAACAGAAGCCTTGAATGCTTGTGCAGGCACATATAAAACAGTTTTAGAATATGATGTTACGGTGGCCATTGAGGCTCTGAAAAAAGGGGATCCTAAGTTTGCAGAAGATGGAGCTAATGATACAGTAATGGAGGTTAATTCATGTGAGGCTGCATTCCCTTCTGGGAAATCGCCCATCACACAGCAGAATAATCTTGTGCGTGATGTTGCACAAGTTGCTGCAGCTATTATCAGAAACTTGCTTTAG 516 0.4535 MANLKLLPPIIFFVIFLSIQSHRASCASLIEQTCKNTPHEALCLQYLKSDPGSSQADITGLALIMVDAMKTTTQQAQAKVQQELKKGHGETEALNACAGTYKTVLEYDVTVAIEALKKGDPKFAEDGANDTVMEVNSCEAAFPSGKSPITQQNNLVRDVAQVAAAIIRNLL 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0780 171 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 28 170 IPR035513 -
Sto3g0780 171 SMART PMEI_2 25 166 IPR006501 GO:0004857
Sto3g0780 171 Gene3D Invertase/pectin methylesterase inhibitor family protein 26 171 IPR035513 -
Sto3g0780 171 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 26 171 - -
Sto3g0780 171 Pfam Plant invertase/pectin methylesterase inhibitor 28 166 IPR006501 GO:0004857
Sto3g0780 171 PANTHER PECTINESTERASE INHIBITOR-LIKE 26 171 - -
Sto3g0780 171 CDD CIF_like 27 170 IPR034087 GO:0004857|GO:0043086
Sto3g0780 171 TIGRFAM PME_inhib: pectinesterase inhibitor domain 10 170 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0780 Sto-Chr3 5411033 5411548 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0780 - - gmx:100306719 165.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0780 3 5411033 5411548 Sto3g0780 3 5411033 5411548 ECH