Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0764 ATGAACACGGCCGATGTGGCCGCAGAGGTGAAATGTCTTCGTAGGTTGATCGGAATGCGATGTTCTAATGTCTATGACCTCTCTCCCAAGACATACGTATTTAAGCTAATGAATAGCAGTGGAGTTACGGAGTCTGGTGAGAGCGAGAAGGTGTTGTTATTGATGGAAAGTGGTGTCAGATTACATACTACTGTATATATGCGTGACAAAAGCAATACTCCTTCTGGTTTTACTCTCAAATTGAGGAAGCATATTCGGACCAGAAGGCTTGAGGATGTGCGGCAACTTGGGTATGATCGGATTATTCTCTTTCAGTTTGGGATGGGTGAGAATGCAAATTATGTTATATTGGAGCTATATGCCCAGGGGAACATCCTCCTCACAGATTCTAATTTTACTGTCTTGACTCTACTTCGATCTCACAGGGATGACGATAAAGGGGTTGCAATCATGTCACGCCATCGTTACCCTACTGAAATTTGTCGAGTTTTTGAGCGAACTACTGCTGCAAAGTTGCAGACAGCTCTGATGTCTTCTAAGGATGCTGATAATGAAGAGGCAGTTGCAgtcaatggaaatgaaaatgatatttCCAATGTCGCAAAAGAGAAGCAGGGAAGCCGCAAGGGTGGAAAGTCATCTAAGACATTGAAAGTTATACTTGGAGAGGCTCTGGGTTATGGACCTGCCCTTTCTgaacatatgatattagatgctGGCCTAATCCCCAATTCGAAAGTTCCAAAAGATAACAAGTGGGATGATGCTACCATTCAGACTTTGGTCCAAGCTGTCGAAAAGTTTGAGGATTGGATGCAAGATATTATTTCAGGTGATAGAATTCCTGAAGGATACATTCTGATGCAAAACAAAGTTTTGGGGAAGGACTCTACCCTCTCTGAACCAGGAAGTTTTAGCCAGTTGTATGATGAGTTCTGCCCACTATTGCTAAATCAGTTTAAGTCAAGGGATTACACAAAGTTTGAGACATTCGATGCAGCTTTAGACGAATTCTACAGCAAAATTGAGAGTCAAAGGGCTGAACAGCAGCAAAAATCCAAAGAAAACTCAGCTGTTCAGAAACTCAATAAAATCCGGCAGGATCAGGAAAACCGAGTGCACAGTTTGAGGAAAGAAGTTGATCACTCTGTTAAAATGGCAGAATTGATAGAATATAACTTAGACGATGTTGATTCTGCTATATTAGCTGTTCGTGTAGCTCTTGCAAAGGGTATGAACTGGGATGATCTTGCTCGGATGgtgaaggaagaaaagaaagctGGTAACCCAGTAGCTGGTCTCATTGACAAGCTCCATCTCGAGAGAAACTGCATGACTTTACTGTTGGGCAACAATCTTGATgaaatggatgatgatgaaaagaCACTTCCAGTGGATAAGGTTGAAGTTGATTTAGCTCTCTCAGCACATGCCAATGCTCGAAGGTGGTATGAACTGAAGAAAAAGCAGGAAAGCAAACAGGAAAAAACTGTAACTGCACATGAAAAGGCATTCAAAGCTGCAGAGAGAAAGACTCGTCAACAGCTTTCTCAGGAAAAAACTGTTGCCACAATTTCACATATGCGCAAAGTTCACTGGTTTGAGAAGTTTAATTGGTTCATTAGCAGCGAGAACTATTTAGTTATCAGTGGACGTGATGCCCAACAGAATGAGATGATAGTCAAGCGATATATGTCCAAAGGAGATCTTTATGTGCATGCTGATCTGCATGGAGCTTCTAGTACTGTTATTAAGAATCACAAGCCTGAGCAACCAGTTCCACCTCTGACCCTCAACCAAGCTGGATGTTTTACAGTCTGCCATAGCCAGGCATGGGATTCAAAAATTGTTACTAGTGCCTGGTGGGTTTATCCTCATCAAGTCAGTAAAACTGCTCCTACAGGGGAATATCTTACAGTGGGAAGTTTCATGATTCGGGGGAAGAAGAACTTTCTTCCACCTCACCCTCTTATTATGGGTTTTGGCCTGCTATTTCGCTTGGATGAGAGTTCCTTGGGATCACATTTAAATGAAAGGAGAGTGAGAGGAGAGGAGGAAGCAATAGATGATCATGAAGAAAATGGCCTTCCTGAAGAAAAATCTGATTCTGAGTCTGAGAATGATGTCGCAGATGAAAAATCTGTGGCAGAAAAGAATGGTAATGTATCTGCAGATTCACATAAATCACTGCCAGAAAACTTTCCTGCAAATAGGGTGGCTACCATTGATGCTGAAACTACAGTTTCATGTGATATTCCTATGGAAGAAAAGGGTATGTTGAATATGGCTGGTAGGGAGAATTCATCTGATATTAGTGATGGTATTGCATCTGTGAACCCACAACTTGAGGAACTTCTTGATCGGGCTCTAGGACTTGGATCTGCTGCTAAATCAGGTAAGAGTTATGGAGCTGAAAGCTCTCAGGTTGATTTAGGTGATGAGCCTCCTGTTGGAGAGAGCAAAGTTGCAGTAAGAGACAAACCTTATGTATCAAAAGCTGAAAGAAGAAAGCATAAGAAAGAACAGAAACAAGGTTTGGCAGATTCAAATGTTGAACATGGAAAGGGTGAATCAAAATTGACTGAAATTTCTGCTAGGCAACCTGCAAAAGAAGTTCAAAATTCAAAGATAGGTGGTCAAAAACCCAGCCGTGGGCAGAGGGGCAAACTTAAGAAGATTAAAGAGAAATATGCTGATCAAGATGAGGAAGAAAGGAGCATTCGAATGGCTTTATTAGCTTCTGCTGGAAAATCAAACAAGAATGAAGATACACATGATGGAAAGGAAGCATCCGACAGAGAGAAAAAACCTGGTCGCGTTCTGGAAGGTTCTACAGAAGCTCCAAAAATATGTTATAAATGCAAGAAGGCAGGTCACCTATCTCGGGATTGTAAAGAGCATCCAGATGAGTCGTTACATACGCATGCTAGTGGGGGAACTGAAGAAAATTTGAGCACGAATATTAGTAACGCTTCTGAAGCTGACAGGGTGACAATGGAAGAGGATGATATTAATGAGATAGgcgaagaagagaaagagaaactaAACGACGTGGATTACTTGACAGGGAGTCCACTCCCTAACGACATCCTCTTATATGCTGTGCCTGTCTGTGGTCCATACACCGCAGTTCAGTCATATAAATATCGGGTGAAGATAATTCCTGGAACTGCGAAGAAAGGAAAAGCTGCAAAAACTGCAATGAATCTGTTCAGCCACATGCCAGAATCAACAAGCCGAGAAAAGGAATTGATGAAAGCCTGTACAGATCCTGAGCTAGTTGCTGCAATTGTTGGTAATGTGAAGATATCGGCCGCTGGTCTTACTCAAttgaagcagaagcagaagaaaggCAAGAAAAGTAGTAAACAAGGAAGTTAG 3381 0.4046 MNTADVAAEVKCLRRLIGMRCSNVYDLSPKTYVFKLMNSSGVTESGESEKVLLLMESGVRLHTTVYMRDKSNTPSGFTLKLRKHIRTRRLEDVRQLGYDRIILFQFGMGENANYVILELYAQGNILLTDSNFTVLTLLRSHRDDDKGVAIMSRHRYPTEICRVFERTTAAKLQTALMSSKDADNEEAVAVNGNENDISNVAKEKQGSRKGGKSSKTLKVILGEALGYGPALSEHMILDAGLIPNSKVPKDNKWDDATIQTLVQAVEKFEDWMQDIISGDRIPEGYILMQNKVLGKDSTLSEPGSFSQLYDEFCPLLLNQFKSRDYTKFETFDAALDEFYSKIESQRAEQQQKSKENSAVQKLNKIRQDQENRVHSLRKEVDHSVKMAELIEYNLDDVDSAILAVRVALAKGMNWDDLARMVKEEKKAGNPVAGLIDKLHLERNCMTLLLGNNLDEMDDDEKTLPVDKVEVDLALSAHANARRWYELKKKQESKQEKTVTAHEKAFKAAERKTRQQLSQEKTVATISHMRKVHWFEKFNWFISSENYLVISGRDAQQNEMIVKRYMSKGDLYVHADLHGASSTVIKNHKPEQPVPPLTLNQAGCFTVCHSQAWDSKIVTSAWWVYPHQVSKTAPTGEYLTVGSFMIRGKKNFLPPHPLIMGFGLLFRLDESSLGSHLNERRVRGEEEAIDDHEENGLPEEKSDSESENDVADEKSVAEKNGNVSADSHKSLPENFPANRVATIDAETTVSCDIPMEEKGMLNMAGRENSSDISDGIASVNPQLEELLDRALGLGSAAKSGKSYGAESSQVDLGDEPPVGESKVAVRDKPYVSKAERRKHKKEQKQGLADSNVEHGKGESKLTEISARQPAKEVQNSKIGGQKPSRGQRGKLKKIKEKYADQDEEERSIRMALLASAGKSNKNEDTHDGKEASDREKKPGRVLEGSTEAPKICYKCKKAGHLSRDCKEHPDESLHTHASGGTEENLSTNISNASEADRVTMEEDDINEIGEEEKEKLNDVDYLTGSPLPNDILLYAVPVCGPYTAVQSYKYRVKIIPGTAKKGKAAKTAMNLFSHMPESTSREKELMKACTDPELVAAIVGNVKISAAGLTQLKQKQKKGKKSSKQGS 1126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0764 1126 Pfam NFACT protein RNA binding domain 536 647 IPR008532 -
Sto3g0764 1126 SUPERFAMILY Retrovirus zinc finger-like domains 947 969 IPR036875 GO:0003676|GO:0008270
Sto3g0764 1126 MobiDBLite consensus disorder prediction 892 908 - -
Sto3g0764 1126 Coils Coil 359 379 - -
Sto3g0764 1126 MobiDBLite consensus disorder prediction 962 976 - -
Sto3g0764 1126 Pfam NFACT protein C-terminal domain 1011 1104 IPR021846 -
Sto3g0764 1126 Gene3D - 944 1001 - -
Sto3g0764 1126 PANTHER - 1 1114 - -
Sto3g0764 1126 Gene3D ibrinogen binding protein from staphylococcus aureus domain 1 158 - -
Sto3g0764 1126 MobiDBLite consensus disorder prediction 677 715 - -
Sto3g0764 1126 MobiDBLite consensus disorder prediction 867 881 - -
Sto3g0764 1126 MobiDBLite consensus disorder prediction 977 994 - -
Sto3g0764 1126 ProSiteProfiles Zinc finger CCHC-type profile. 951 966 IPR001878 GO:0003676|GO:0008270
Sto3g0764 1126 MobiDBLite consensus disorder prediction 795 942 - -
Sto3g0764 1126 Pfam NFACT N-terminal and middle domains 5 156 - -
Sto3g0764 1126 Pfam NFACT N-terminal and middle domains 214 528 - -
Sto3g0764 1126 MobiDBLite consensus disorder prediction 919 942 - -
Sto3g0764 1126 MobiDBLite consensus disorder prediction 962 999 - -
Sto3g0764 1126 PANTHER NUCLEAR EXPORT MEDIATOR FACTOR NEMF 1 1114 - -
Sto3g0764 1126 SMART c2hcfinal6 950 966 IPR001878 GO:0003676|GO:0008270
Sto3g0764 1126 MobiDBLite consensus disorder prediction 840 860 - -
Sto3g0764 1126 MobiDBLite consensus disorder prediction 677 734 - -
Sto3g0764 1126 Pfam Zinc knuckle 950 966 IPR001878 GO:0003676|GO:0008270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0764 K24971 - gmx:100807437 1787.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0764 3 5279440 5286979 Sto3g0764 3 5279440 5286979 ECH