Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0161 ATGTCTGCGGCTGTGGGAGCTGTCTCTGCAACTAAAGATGTTACCTTTAATCCTCATCCTGAGGAAGATTTCAGCAACAATCAAGCTCACGACACTGAAACTGAGACTGAGACTGAGACAGAGACTGAggcagaggaagaagatgagtccAAGAATGAATCTGATAGAGAATTACTGCATCTTGGCCCTCAAGTTTCCCTCAAGGAACAGCTTGAGAAAGATAAAGAAGATGAGAGTTTGAGGAAATGGAAGGAGCAACTTCTTGGGAGTGTTGACATCTCTGCTTTTGGAGAGAGCAAAGACCCAGAAGTGAAAATAGTGAGCCTCACTATATTATGCCCTGGAAGGCCAGACCTGATTCTGCCAATTCCATTTACTGCTACTACTACTTCTAAGAAGTGTCTCTTCACACTCAAGGAAGGAAGCCGATACCGCTTGAAATTCACCTTCACTGTCTCCAACAACATCGTTTCTGGCCTCAAATACACCAATGTTGTGTGGAAAACTGGTGTTAGAGTGGACAACCTAAAAAGAATGTTGGGAACTTTTAGCCCACAACAGGACCCATATACCTATGAATTGGAAGAAGAAACTACCCCTTCTGGATTGTTTGCTAGAGGAACCTATTCAGCAACAACCAAGGATTTGTTCATCATATCATGTTATTTGCCATTGTGCATGCACATGCATGCTTGTGCTTCTTCCCCTTCCTTCTatgctttcttttccttttttgattGCAATCCAATCTTTCCACCCTCAACCACTAGCTTAGCAGCTGTTACCAACCAATGTCCAGGAGCATCATGTGGGCCTCTCACAACCTCAGATGTCTCCACAAATTTTAGCAGTTTACCGGAGCGAACTGGCACAGTTGTGCTGAGATTTGTGAGGAAAGAAGATTTCCTTGAAGCCTCTGGTGCAGAAGACCACTCTGTCTTCCGGATACTGCAATTCGATCCTCGCCACATAGATGGTCTGCTCATGGTTGGGTTACTTGATGAGAGGATCATAGTATTAGGAAGGCCAGAGAGATGCTGTACATGTAATGCCAGTCTATCACATTTCCTGCCTTCCAAATACAAGCGGAGGCCAACAACGGGTTTTTCTTCACTGCTTACCTGGCATTTTGTAGAAAATATCCAAGTTAACAAGAGAAATATAGTATCAACTTTGAGAATAAGTGAAGCAGCATAA 1197 0.4202 MSAAVGAVSATKDVTFNPHPEEDFSNNQAHDTETETETETETEAEEEDESKNESDRELLHLGPQVSLKEQLEKDKEDESLRKWKEQLLGSVDISAFGESKDPEVKIVSLTILCPGRPDLILPIPFTATTTSKKCLFTLKEGSRYRLKFTFTVSNNIVSGLKYTNVVWKTGVRVDNLKRMLGTFSPQQDPYTYELEEETTPSGLFARGTYSATTKDLFIISCYLPLCMHMHACASSPSFYAFFSFFDCNPIFPPSTTSLAAVTNQCPGASCGPLTTSDVSTNFSSLPERTGTVVLRFVRKEDFLEASGAEDHSVFRILQFDPRHIDGLLMVGLLDERIIVLGRPERCCTCNASLSHFLPSKYKRRPTTGFSSLLTWHFVENIQVNKRNIVSTLRISEAA 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0161 398 MobiDBLite consensus disorder prediction 36 52 - -
Sto3g0161 398 Gene3D Coagulation Factor XIII, subunit A, domain 1 57 216 IPR024792 -
Sto3g0161 398 PANTHER RHO PROTEIN GDP-DISSOCIATION INHIBITOR-RELATED 11 223 - -
Sto3g0161 398 MobiDBLite consensus disorder prediction 1 75 - -
Sto3g0161 398 PRINTS RHO protein GDP dissociation inhibitor signature 97 112 IPR000406 GO:0005094|GO:0005737
Sto3g0161 398 PRINTS RHO protein GDP dissociation inhibitor signature 156 172 IPR000406 GO:0005094|GO:0005737
Sto3g0161 398 PRINTS RHO protein GDP dissociation inhibitor signature 173 188 IPR000406 GO:0005094|GO:0005737
Sto3g0161 398 MobiDBLite consensus disorder prediction 16 35 - -
Sto3g0161 398 PANTHER RHO GDP-DISSOCIATION INHIBITOR 11 223 IPR000406 GO:0005094|GO:0005737
Sto3g0161 398 SUPERFAMILY E set domains 44 213 IPR014756 -
Sto3g0161 398 Pfam RHO protein GDP dissociation inhibitor 45 214 IPR000406 GO:0005094|GO:0005737
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0161 Sto-Chr3 1006918 1011747 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0161 K12462 - gmx:100806852 277.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0161 3 1006918 1011747 Sto3g0161 3 1006918 1011747 ECH