Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0139 TTGACAGATGTTTCACGGGAAGTATCTGTAGAGGAAAAACAGCTTCCCAAAGGAGACACTTGGTCTGTTCATAAATTTGGAGGAACATGTGTGGGAACTCCTCTAAGAATTAAGAATGTTGCAGATATAATAATCAATGATGATTCGGAGAGGAAATTGGTGGTTGTCTCTGCAATGTCAAAGGTGACAGATATGATGTATGACCTTATTTACAAGGCACAGTCACGTGATGAATCCTATATATCTGCACTGGATGTTGTTTTAGAGAAGCACAGCACTGCTGCACATGAACTACTTGATGGAGATGATCTTGCTCTTTTCTTATCAAAATTAAACGAAGACATCACAAACCTCAAGGCAATGCTTCGAGCTATTTATATTGCTGGTCATGCAACAGAATCCTTCACAGATTTTGTCGTGGGACATGGGGAGTTATGGTCTGCTCATATGCTGTCTTCTGTTATTCGGAAGAATGGGACTGACTGCAAATGGATGGATACAAGGGAAGTCCTTATTGTAAACCCTACTGGTTCTAATAGTAATCAAGTTGATCCTGATTATTTCGAAACTGAGCGCAGACTCAAGAAATGGTACTCTTCAAATCCATCCAAGGTAATTATTGCTACTGGATTTATTGCAAGCACACCTCAAAATATTCCCACTACGCTGAAGAGAGATGGAAGTGATTTCTCGGCAGCAATCATGGGTGCTCTATTTAAGGCCCGTCAGGTCACAATTTGGACAGATGTTGATGGTGTGTATAGTGCAGATCCTAGGAAAGTTAGTGAGGCTGTAATTTTGAAGACGTTGTCTTATCAAGAGGCATGGGAAATGTCTTATTTTGGTGCAAATGTTTTACATCCCCGTACAATCATTCCAGTGATGCAATATGGCATACCCATTATAATAAGGAACATTTTCAACCTCTCTGCCTCAGGGACAAAGATCTGCGACTCCTCCATCAATGATGATGAAGATAAGCAGaacttaaattattttgttaaagGGTTTGCCACTATAGACAACTTGGCCCTTGTAAATGTTGAGGGGACTGGAATGGCAGGTGTTCCTGGTACAGCCAGTGCTATTTTTGCTGCGGTAAAAGATGTTGGAGCTAATGTTATCATGATATCTCAGGCTAGTAGTGAGCATTCTGTGTGCTTTGCTGTACCTGAGAAGGAAGTAAAAGCTGTTGCTGAAGCATTGCAGTCCAGATTTCGCCAAGCTTTGGATGCCGGGCGTCTATCTCAGGTTGCAATTATTCCAAACTGTAGCATTTTGGCTGCTGTTGGCCAGAAAATGGCAAGTACTCCTGGAGTTAGTGCCTCCCTGTTCAATGCGTTGGCTAAGGCCAACATCAATGTCCGTGCTATAGCACAAGGTTGTTCTGAGTACAATATCACTGTTGTTCTTAAGCGAGAAGATTGTATAAAGGCTCTTCGGGCCGTCCATTCAAGATTTTATCTCTCAAGAACCACCATAGCGATGGGCATTATTGGACCTGGATTAATTGGGAGTACTCTACTTGACCAGCTAAGGGATCAGGCTGCAGTTCTGAAAGAAGAATTTAACATTGATTTGCGTGTACTGGGCATCATTGGTTCAAGTTCTATGCTTCTTAGTGATATCAGGGGTATTGACTTAGCTGGGTGGAAAGAACTTAGAAAGGAAAAAGGAGAAGTGGCTAATATGGAAAAGTTCGTTCAACATGTGCATGGAAAtcattttataccaaacactgTTTTAGTGGACTGCACAGCTGACTCCATCGTTGCAGGCCATTACTATGACTGGTTGTGCAAAGGTATACATGTAGTCACCCCCAATAAAAAGGCGAATTCAGGACCACTTGATCAGTATTTAAGGTTAAGAGCTCTTCAAAGGCAATCCTACACACATTACTTCTATGAAGCTACTGTTGGAGCTGGTCTTCCAATTATTAGCACGTTACGAGGCCTCCTTGAAACAGGAGACAGAATATTGCAAATTGAAGGCATTTTCAGTGGGACTTTGAGTTACATCTTTAATAATTTCAAAGATGGCCGGCTTTTTAGTGAGGTAGTTGCTGAAGCAAAGGAAGCAGGTTATACTGAGCCCGATCCAAGGGATGATCTGTCTGGAACAGATGTTGCTAGAAAGGTGATAATTCTTGCGAGAGAATCTGGTGTAAAGCTTGAACTATCCGATATTCCTGTTGAGAGCCTTGTGCCAGAACCACTAAGAGCTAGTGCGTCAGCTCAGGAGTTTATGCAACAACTTCCTAAATTTGACGAGGATATGGCAAAGAAACAACAGGAGGCTGATAATGCAGGGGAAGTCTTGAGATATGTGGGGGTGGTGGATGTGGCTAATGAAAAAGGAGTAGTTGAGCTGCGAAGATACAAGAAAGATCATCCATTCGCACAGCTTTCTGGGTCAGATAATATAATTGCATTTACCACAAGAAGGTATCAGAATCAACCTCTGATAGTTCGTGGACCAGGAGCTGGTGCTCAAGTCACAGCTGGTGGAGTGTTCAGTGACATTTTACGACTTGCCTCATATCTTGGTGCACCATCATAG 2562 0.418 LTDVSREVSVEEKQLPKGDTWSVHKFGGTCVGTPLRIKNVADIIINDDSERKLVVVSAMSKVTDMMYDLIYKAQSRDESYISALDVVLEKHSTAAHELLDGDDLALFLSKLNEDITNLKAMLRAIYIAGHATESFTDFVVGHGELWSAHMLSSVIRKNGTDCKWMDTREVLIVNPTGSNSNQVDPDYFETERRLKKWYSSNPSKVIIATGFIASTPQNIPTTLKRDGSDFSAAIMGALFKARQVTIWTDVDGVYSADPRKVSEAVILKTLSYQEAWEMSYFGANVLHPRTIIPVMQYGIPIIIRNIFNLSASGTKICDSSINDDEDKQNLNYFVKGFATIDNLALVNVEGTGMAGVPGTASAIFAAVKDVGANVIMISQASSEHSVCFAVPEKEVKAVAEALQSRFRQALDAGRLSQVAIIPNCSILAAVGQKMASTPGVSASLFNALAKANINVRAIAQGCSEYNITVVLKREDCIKALRAVHSRFYLSRTTIAMGIIGPGLIGSTLLDQLRDQAAVLKEEFNIDLRVLGIIGSSSMLLSDIRGIDLAGWKELRKEKGEVANMEKFVQHVHGNHFIPNTVLVDCTADSIVAGHYYDWLCKGIHVVTPNKKANSGPLDQYLRLRALQRQSYTHYFYEATVGAGLPIISTLRGLLETGDRILQIEGIFSGTLSYIFNNFKDGRLFSEVVAEAKEAGYTEPDPRDDLSGTDVARKVIILARESGVKLELSDIPVESLVPEPLRASASAQEFMQQLPKFDEDMAKKQQEADNAGEVLRYVGVVDVANEKGVVELRRYKKDHPFAQLSGSDNIIAFTTRRYQNQPLIVRGPGAGAQVTAGGVFSDILRLASYLGAPS 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0139 853 ProSitePatterns Aspartokinase signature. 23 31 IPR018042 GO:0004072|GO:0008652
Sto3g0139 853 ProSiteProfiles ACT domain profile. 348 423 IPR002912 -
Sto3g0139 853 Gene3D Aspartokinase, catalytic domain 60 159 IPR042199 -
Sto3g0139 853 SUPERFAMILY Carbamate kinase-like 21 318 IPR036393 -
Sto3g0139 853 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 645 830 - -
Sto3g0139 853 ProSitePatterns Homoserine dehydrogenase signature. 691 713 IPR019811 GO:0006520
Sto3g0139 853 Gene3D - 331 489 - -
Sto3g0139 853 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 492 667 IPR036291 -
Sto3g0139 853 Pfam Amino acid kinase family 22 305 IPR001048 -
Sto3g0139 853 Pfam ACT domain 352 406 IPR002912 -
Sto3g0139 853 ProSiteProfiles ACT domain profile. 429 506 IPR002912 -
Sto3g0139 853 TIGRFAM asp_kinases: aspartate kinase 22 487 IPR001341 GO:0004072|GO:0008652
Sto3g0139 853 Pfam ACT domain 422 485 IPR027795 -
Sto3g0139 853 Gene3D - 23 316 IPR036393 -
Sto3g0139 853 PANTHER - 1 853 IPR011147 GO:0004072|GO:0004412|GO:0009067
Sto3g0139 853 SUPERFAMILY ACT-like 332 407 IPR045865 -
Sto3g0139 853 CDD ACT_AKi-HSDH-ThrA-like_1 343 422 - -
Sto3g0139 853 PIRSF ThrA 21 850 IPR011147 GO:0004072|GO:0004412|GO:0009067
Sto3g0139 853 PANTHER ASPARTOKINASE-HOMOSERINE DEHYDROGENASE 1 853 - -
Sto3g0139 853 Pfam Homoserine dehydrogenase, NAD binding domain 500 637 IPR005106 GO:0016491|GO:0050661
Sto3g0139 853 Gene3D Dihydrodipicolinate Reductase; domain 2 656 827 - -
Sto3g0139 853 SUPERFAMILY ACT-like 414 503 IPR045865 -
Sto3g0139 853 CDD AAK_AK-HSDH 21 317 IPR041743 -
Sto3g0139 853 Gene3D - 495 845 - -
Sto3g0139 853 Pfam Homoserine dehydrogenase 645 843 IPR001342 GO:0006520
Sto3g0139 853 CDD ACT_AKi-HSDH-ThrA_2 424 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0139 Sto-Chr3 851219 860100 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0139 K12524 - gmx:100812202 1510.35