Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0137 ATGTCGGTGGCTTGTAGCAGATCAAGTCTAGGTATGATGGCAAGTGGAGTAATCAATGTGGTAAGGGGTTCAAGATCGTCAGTTGAAGAGCTATTGCAAATATACAACCACTCCGAAAGTGTTGCACTTGTTGTGGACAGTCCTGAAATGTTTAATCGGATTGCACAGACATTCTATTCTAAGACTTCCATGAGATTTCTTATTCTACTTTGGGGAGAAAAATCACACTTACTTGGTGAAATGAACAAGGAGCTGCCTGTCTTTAGTTTCATGGAAATCATGGATTTGGGGCAACAAAGTCGCAAGACCTCATCTCATGATACTAAGCAGCACTACGTGTATGAAGCTATAAACTCTGATGACATTGCTGCTATTATGTACACAAGTGGTACTACTGGAAATCCAAAAGGTGTTATGCTTACCCATCGGAATCTTCTGCATCAGATGAAGAACTTATGGGATATTGTACCTGCTGGACCTGGAGATAGATTTCTAAGCATGCTGCCATCTTGGCATGCATATGAAAGAGCTTGTGAGTATTTCATTTTCTCACATGGAATTGAGCAAGTATACACAACCGTGAGAAATCTGAAGgaTGATTTGAAACGTTATCAGCCCCATTACCTTATTGCTGTTCCTTTAGTTTATGAAACATTATACAGTGGGATCCAGAAGCAGATATCTACAAGCTCCTTCGTTAGAAAGCTTGTTGCTCTGACTTTCATAAGGGTCAGCTTAGCATACATGGAGTGTAAGAGGATTTATGAGGGCAATTGTCTAACAACACATCAGAATCAGCCTTCCTATGTCTATTCAATATTGGATTGGCTATGGGCAAGAATTGTTGCCATAATATTATATCCTGTTCATGCGTTGGCAAAGAAACTTGTCTACAGTAAAATCCATTCAGCTATTGGAATATCAAAGGCTGGAATAAGTGGTGGTGGTAGTTTGCCATTGCATGTTGATAAATTTTTCGAGGCAATTGGCGTGAAACTGCAGAATGGATATGGTTTAACGGAGACTGCACCAGTCAATGCTGCTCGACGACCTGGATGTAATGTTATTGGATCTGTTGGCCCTCCCATTCGATATGTAGAATTCAAAACTGTAGATCCTGAAACTGATGAAGTTCTTCCACCTGGTTCAAAGGGCCTGTTGAAAGTCAGGGGCCCACAAGTGATGAAAGGCTACTACAAGAATCCTTCAGCTACAGATCAAGCCATAGATAAGGATGGCTGGCTGAATACTGGAGATATAGGTTGGATTGTCCCTCGACATTCGATTGGGAGGAGTCGTCATTCTGGAGGTATGGTTGTTGTGGAAGGCCGTGCAAAAGACACTATTGTGCTTTCAACAGgagagaatgTTGAACCAATAGAACTTGAAGAAGCAGCCATGAGGAGTAGCCTAATTCAACAAATTGTTGTTGTTGGTCAGGATAAGCGACGCCTAGGAGCTGTAATTGTTCCTAACAAAGAAGAAATTGCGAAGACAGCCAGGAATATGTCAATCATAGATTCCAACAGTTCTTTTGTCAGTAAGGAACAAGTGACCAGTTTAATATATAAAGAATTGAGGAAATGGACATCAGAATCTTCATTTCAAATTGGACCAATCCTCCTTGTAAATGAGCCCTTCTCGATTGATAATGGCCTAATGACTCCCACCATGAAAATTCGAAGGGATAAAGTTGTGGCTCAATATAGGGAGCAAATAGACGATCTGTACAAGTAA 1737 0.4064 MSVACSRSSLGMMASGVINVVRGSRSSVEELLQIYNHSESVALVVDSPEMFNRIAQTFYSKTSMRFLILLWGEKSHLLGEMNKELPVFSFMEIMDLGQQSRKTSSHDTKQHYVYEAINSDDIAAIMYTSGTTGNPKGVMLTHRNLLHQMKNLWDIVPAGPGDRFLSMLPSWHAYERACEYFIFSHGIEQVYTTVRNLKDDLKRYQPHYLIAVPLVYETLYSGIQKQISTSSFVRKLVALTFIRVSLAYMECKRIYEGNCLTTHQNQPSYVYSILDWLWARIVAIILYPVHALAKKLVYSKIHSAIGISKAGISGGGSLPLHVDKFFEAIGVKLQNGYGLTETAPVNAARRPGCNVIGSVGPPIRYVEFKTVDPETDEVLPPGSKGLLKVRGPQVMKGYYKNPSATDQAIDKDGWLNTGDIGWIVPRHSIGRSRHSGGMVVVEGRAKDTIVLSTGENVEPIELEEAAMRSSLIQQIVVVGQDKRRLGAVIVPNKEEIAKTARNMSIIDSNSSFVSKEQVTSLIYKELRKWTSESSFQIGPILLVNEPFSIDNGLMTPTMKIRRDKVVAQYREQIDDLYK 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0137 578 ProSitePatterns Putative AMP-binding domain signature. 125 136 IPR020845 -
Sto3g0137 578 Gene3D - 309 352 - -
Sto3g0137 578 PRINTS AMP-binding signature 120 131 IPR020459 -
Sto3g0137 578 PRINTS AMP-binding signature 132 140 IPR020459 -
Sto3g0137 578 Pfam AMP-binding enzyme 9 451 IPR000873 -
Sto3g0137 578 PANTHER LONG-CHAIN-FATTY-ACID COA LIGASE (AMP-FORMING) 10 578 - -
Sto3g0137 578 PANTHER ACYL-ACTIVATING ENZYME 16, CHLOROPLASTIC-RELATED 10 578 - -
Sto3g0137 578 Gene3D Luciferase; Domain 3 353 423 - -
Sto3g0137 578 Gene3D - 446 576 IPR045851 -
Sto3g0137 578 Gene3D - 2 252 IPR042099 -
Sto3g0137 578 SUPERFAMILY Acetyl-CoA synthetase-like 9 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0137 Sto-Chr3 827952 837321 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0137 11 578 Acyl Lipid Metabolism Gene Families AT3G23790 69.649 0.0 836
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0137 K01897 - gmx:100812745 927.161