Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0128 ATGCAGTTGTCAGAAAATATGCAAGGCTTATTTGCTATCCTTTTCCTATGTTTTGTTACTTCACCTTGCTTATGTGCCAGAACATTAACAACTCAAGCTAATCCTACATTCAATATACTTAATTTTGGTGCTAAAGGGAATGGCCAAGATGATGATTCACAGGCTTTCCTCAAAGCATGGGGTGCTGTTTGTAATGCAACTCAGGGCATTCCAACCCTCTTCATACCCAAAGGGAAAACTTTCATGTTGCAGCCTCTGGTTTTTCAGGGTCCTTGCAAGCCTTCAACCATTAATTTTAAGATTGAAGGAACTATCACTGCCCCAAGAAGCGTTAATGCTTGGAAATGGCCAGATAGTCATAGGGACTCATGGATTCAATTCAGCTACATAAATGGGCTTTCCATCACAGGAAGAAGCCTTATTGATGGCCAAGGTGCTCCATGGTGGGACTGTTTTGCTAAATCCAGATGTGAGAGACCAATGGCTTTGAGTTTCCACAGCTGTGAAAATCTGCAACTCAGTGGGGTGACTCAGATAAACAGCCCAGGAGGTCACGTAAAAGTATATGCTTCCAATGGCACACGCATCTCTGATATGCACCTTGTTTCACCTAAAGATAGTCCAAACACTGATGGGCTTCATATTTCAGCATCATCCAATGTTGCCGTTGAGAATTCTACAACGGAAGTTGGTGATGACTGCATAGCCATTCTTGGAGGCACTTCCTTCGTCAACATTAGTGGTATATATTGTGGACCTGGTCATGGCATAAGCATTGGAAGCCTCGGAGGAAATGGAGTTCATGCCACAGTAGAAGAGATCCATGTCAAAAATTGTACCTTCACAAGAAGTTCAAGTGGGGCAAGAATCAAGACACGGGAGGGAGGATCTGGGTATGTCAGAAAGATCACATATGAGGATATAGTACTGGTAGAAGTACAGAGCCCAATACTTATTGTCCAGAACTATGGTTCTCTCTTGCCAATTGATGCCGGACAAGCAGTAAAAGTCAGTGACATTACTTACAGGAATTTTCGAGGAACTGCTTCTTTTGATAGTGCAATCCAATTGATCTGTGACAAAGTCATAGGATGCAGCAACGTAGTGTTGGATCAGATTCAGATAACCTCGTCTGTTCCTGGAAAGAAGACTAATGCAACGTGCTTGAATGCTCATGGAACAAGTTCTTCATCCAATGTTCCCCAAATTCCATGCCTTTTAAAGTGA 1227 0.4262 MQLSENMQGLFAILFLCFVTSPCLCARTLTTQANPTFNILNFGAKGNGQDDDSQAFLKAWGAVCNATQGIPTLFIPKGKTFMLQPLVFQGPCKPSTINFKIEGTITAPRSVNAWKWPDSHRDSWIQFSYINGLSITGRSLIDGQGAPWWDCFAKSRCERPMALSFHSCENLQLSGVTQINSPGGHVKVYASNGTRISDMHLVSPKDSPNTDGLHISASSNVAVENSTTEVGDDCIAILGGTSFVNISGIYCGPGHGISIGSLGGNGVHATVEEIHVKNCTFTRSSSGARIKTREGGSGYVRKITYEDIVLVEVQSPILIVQNYGSLLPIDAGQAVKVSDITYRNFRGTASFDSAIQLICDKVIGCSNVVLDQIQITSSVPGKKTNATCLNAHGTSSSSNVPQIPCLLK 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0128 408 Pfam Glycosyl hydrolases family 28 70 394 IPR000743 GO:0004650|GO:0005975
Sto3g0128 408 SUPERFAMILY Pectin lyase-like 28 406 IPR011050 -
Sto3g0128 408 ProSitePatterns Polygalacturonase active site. 248 261 IPR000743 GO:0004650|GO:0005975
Sto3g0128 408 Gene3D - 23 404 IPR012334 -
Sto3g0128 408 PANTHER - 30 406 - -
Sto3g0128 408 PANTHER - 30 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0128 Sto-Chr3 799987 802242 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0128 10 400 Glycoside Hydrolase AT5G17200 41.866 9.04e-110 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0128 K01184 - jre:108997191 399.823