Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0115 ATGGAAAATCAAGAGAGATTTTCACGGCTTGCCTCCTTCATTTGTGACTTTGACGACGATGAGCCTTTCTCAGATCAAGATCTACGTGCCATCGATGCCATTGAAGCTCAGTTTCAATCTTCTTTGCGCAACAAACGCAATGAAAGGATGCGGTTACCAGAAATGAAGTTTGGTGGCCACATTTCGTATTGCAAGACGGCCACTGGTGCCGACAAAATTTCATTGGAACTCTTAAAAATAGTCcaacaaaataaaagagagatgGTCCAAACCGTATTAGGATTCGATATTGAGTGGAGACCCTCCTTCACAACAAgTGTTCCAAATGGGAAGGCAGCAGTGGTGCAGATATATGCTGGAACTGGACGCTGTTATGTTCTACAAATAATCCATTCTGGAATCCCTCAAAATCTACAGCTTATGCTTGAAGATCCTGAAATCTTGAAGGTTGGGGTTAACATCGCGAATGATGCTCGTAAGCTTTTTAATGACTATAAAGTATCAGTTAAAGGTCTGGAAgatctttcttttcttgccaATCAAAAGCTAGGTGGAAATGTTCGGTACCGTAGTCTAGCACATCTAACTGAGAAACTACTATCGAAAGAGCTTCCGAAACCCTCCAGAATAAGAATGGGAAATTGGGAGTCTAATCCCTTGTCAGATGAGCAAATAGAGTATGCTGCCATAGATGCTTATGCTTCTTGGTATCTCTTTAAGGTGCTTAAGGACCTCCCGAATATTGCCAGAGAAGCTGTAGTTGAGGAATGA 771 0.3995 MENQERFSRLASFICDFDDDEPFSDQDLRAIDAIEAQFQSSLRNKRNERMRLPEMKFGGHISYCKTATGADKISLELLKIVQQNKREMVQTVLGFDIEWRPSFTTSVPNGKAAVVQIYAGTGRCYVLQIIHSGIPQNLQLMLEDPEILKVGVNIANDARKLFNDYKVSVKGLEDLSFLANQKLGGNVRYRSLAHLTEKLLSKELPKPSRIRMGNWESNPLSDEQIEYAAIDAYASWYLFKVLKDLPNIAREAVVEE 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0115 256 SMART 35exoneu6 61 247 IPR002562 GO:0003676|GO:0006139|GO:0008408
Sto3g0115 256 CDD WRN_exo 87 243 - -
Sto3g0115 256 Gene3D - 42 250 IPR036397 GO:0003676
Sto3g0115 256 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN-RELATED 40 248 - -
Sto3g0115 256 PANTHER 3-5 EXONUCLEASE 40 248 - -
Sto3g0115 256 SUPERFAMILY Ribonuclease H-like 91 243 IPR012337 -
Sto3g0115 256 Pfam 3'-5' exonuclease 85 243 IPR002562 GO:0003676|GO:0006139|GO:0008408
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0115 Sto-Chr3 716827 720442 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0115 K22807 - vvi:100264183 254.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0115 3 716827 720442 Sto3g0115 3 716827 720442 ECH