Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0078 ATGGGATCGAAAAGCTCCATGGATGTAGCTTTGTTGACTTGCAGCGTGGTGCTTGTTGTGTTTGGTAATTTGGCGTCGTCGGATTTGGCGAAAGACAGAGAAGAGTGCGCGAACCAACTGGTAGGGCTGGCTCCTTGCCTTCCATACGTTGGTGGTGAGGCCAAAACTCCCACCATCGATTGCTGTAGTGGTCTCAAACAAGTGGTGGAGAAGAGCATGAAGTGCCTCTGCGTCCTCATCAAAGACCGCAACGACCCCGACCTCGGCATCACCTTCAATGCCACTCTCGCCCTCCACCTTCCCTCTTCCTGTCATACTCCTGCTAACATTTCTCACTGCCTTGATCTTTTGCATCTCGCCCCTAATTCTCCCGAGGCTAAGGTGTTCCAGGGATTTGATAAGGCCGCTCAGTCAACCCCCGCTGCTCCCACTGGCAAGGGACCAAGCCCTAGCTCCAATATAACCACCCCAACCTCTGATGCAAAGAGTCATGGTGGCGTTTCTCTATTCACAAAGAGGTGGCTCGTTGCAGAGGTGTTGTGTGTCATTCTACCCTCTCTCTTCATCTTCCTGCCCTGA 579 0.5268 MGSKSSMDVALLTCSVVLVVFGNLASSDLAKDREECANQLVGLAPCLPYVGGEAKTPTIDCCSGLKQVVEKSMKCLCVLIKDRNDPDLGITFNATLALHLPSSCHTPANISHCLDLLHLAPNSPEAKVFQGFDKAAQSTPAAPTGKGPSPSSNITTPTSDAKSHGGVSLFTKRWLVAEVLCVILPSLFIFLP 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0078 192 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 12 186 - -
Sto3g0078 192 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 12 186 IPR043325 -
Sto3g0078 192 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 35 114 IPR036312 -
Sto3g0078 192 SMART aai_6 36 113 IPR016140 -
Sto3g0078 192 Pfam Probable lipid transfer 29 113 IPR016140 -
Sto3g0078 192 Gene3D - 33 113 IPR036312 -
Sto3g0078 192 MobiDBLite consensus disorder prediction 137 165 - -
Sto3g0078 192 MobiDBLite consensus disorder prediction 142 165 - -
Sto3g0078 192 CDD AAI_LTSS 43 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0078 Sto-Chr3 449332 450068 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0078 7 191 Acyl Lipid Metabolism Gene Families AT2G44290 47.208 2.36e-56 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0078 - - pvu:PHAVU_001G268300g 216.083