LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto2g2838	ATGGCGTCgtggtcatcatcatcatgcatTAATAATGTTGTATGTTTTTGTTTGTTGGTTAAAGTAGTAGTAGTGGTGGAGGCGGCATTAATAGAAGAATTCTTGAAGGCCCACAATGCGGCGAGGTTGGAGGTGGGTGTGCCCCCAATAGAGTGGGACAACACGGTGGCCCAATACGCGCAGGAGTATGCCAACACCCGCAAAGCCGAATGCAAGCCGGAGCACTCGGGTGGGCCCTACGGGGAGAACCTCGTCTGGAGCTCCGGCGACATGAGCGCGGCCGACGCCGTGGCCATGTGGGTGAAGGAGAAAGCTTTCTATGACTACCCTAACAATAGGTGTATGGATGGGCAGCAGTGCCTGCACTACACTCAGGCATACTCACAAGTAGAAGTGAAGGCCAAGACTCAGCACAAGACTACGTGGATGGCCATAACGCAGCAAGAGCAGAGGTGGGGGGTTCCAAATTTGGCATGGGACAATACCGTGGCTGCCTTCGCTCACAACTACGCGAACCAGCGCAAGGAGGATTGCCAGCTGGTGCACTCGGGTGGGGCGTACGGGGAGAACCTGGCCGGGAGCACAGGTGATCTGAGTGGTGCGGACGCGGTGAGGCTGTGGGTGGAGGAGAAGCCCATTGACAACACCATTCCTCTCCCTGTAGACATTGTCGACAGTGATACCGAGGATGAAACAACGCCTCAAGACAAAGGGGGTTGTGGAAGCTCTTCTAAAGGCATACAGAACCAACATATCCAAGATTCTGAGCCCTTGGGGCGTGGACACCGACACAAAGAAGTACCATCACGTTTAAAAGACTATGTGATTCATACTATTACCCACACAAGTCCATCCGTCCTCACACCTACATCTCAGCATACCTCAGCGCTTACCGTTGAACGAGAACCACTTTGTTATTCTCATGCGGTCAAAGATCATCGCTGGCGAGAGGCTATGCGACGTGAAATTGAAGCTCTTGAGACCAATAAAACTTGGGAGAAGGCCAACTACAACTATGAGAATAACTCGTGCGAGGGCGGGGAGTGTCTCCATTACACCCAGGTGGTGTGGAGCACGTCGGTTAGACTTGGGTGTGCTAAGGTAACGTGTACAACGGAGGCACCTTCATTACCTGCAACTATGATCCTCCTGGCAACGTTCTAG	1164	0.5198	MASWSSSSCINNVVCFCLLVKVVVVVEAALIEEFLKAHNAARLEVGVPPIEWDNTVAQYAQEYANTRKAECKPEHSGGPYGENLVWSSGDMSAADAVAMWVKEKAFYDYPNNRCMDGQQCLHYTQAYSQVEVKAKTQHKTTWMAITQQEQRWGVPNLAWDNTVAAFAHNYANQRKEDCQLVHSGGAYGENLAGSTGDLSGADAVRLWVEEKPIDNTIPLPVDIVDSDTEDETTPQDKGGCGSSSKGIQNQHIQDSEPLGRGHRHKEVPSRLKDYVIHTITHTSPSVLTPTSQHTSALTVEREPLCYSHAVKDHRWREAMRREIEALETNKTWEKANYNYENNSCEGGECLHYTQVVWSTSVRLGCAKVTCTTEAPSLPATMILLATF	387

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto2g2838	387	SUPERFAMILY	PR-1-like	333	372	IPR035940	-
	Sto2g2838	387	Gene3D	CAP	289	383	IPR035940	-
	Sto2g2838	387	Gene3D	CAP	142	241	IPR035940	-
	Sto2g2838	387	Gene3D	CAP	31	141	IPR035940	-
	Sto2g2838	387	PANTHER	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	328	372	IPR001283	-
	Sto2g2838	387	PANTHER	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	22	132	IPR001283	-
	Sto2g2838	387	PANTHER	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	152	212	IPR001283	-
	Sto2g2838	387	MobiDBLite	consensus disorder prediction	218	266	-	-
	Sto2g2838	387	PANTHER	PATHOGENESIS-RELATED PROTEIN 1B-LIKE	22	132	-	-
	Sto2g2838	387	PANTHER	PATHOGENESIS-RELATED PROTEIN 1B-LIKE	152	212	-	-
	Sto2g2838	387	PANTHER	PATHOGENESIS-RELATED PROTEIN 1B-LIKE	328	372	-	-
	Sto2g2838	387	SUPERFAMILY	PR-1-like	152	212	IPR035940	-
	Sto2g2838	387	SMART	SCP_3	29	156	IPR014044	-
	Sto2g2838	387	Pfam	Cysteine-rich secretory protein family	325	371	IPR014044	-
	Sto2g2838	387	Pfam	Cysteine-rich secretory protein family	35	125	IPR014044	-
	Sto2g2838	387	SUPERFAMILY	PR-1-like	20	125	IPR035940	-
	Sto2g2838	387	PRINTS	Allergen V5/Tpx-1 family signature	157	175	IPR001283	-
	Sto2g2838	387	PRINTS	Allergen V5/Tpx-1 family signature	349	365	IPR001283	-
	Sto2g2838	387	MobiDBLite	consensus disorder prediction	235	255	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto2g2838	Sto-Chr2	41869869	41875300	Proximal

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto2g2838	K13449		-	ini:109189528	144.821

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Sto2g2838	2	41869869	41875300	Sto2g2838	2	41869869	41875300	ECH