Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2836 atgaGGAGGAGCATTAGtaatattgttgttgttgaagtGGTGTTAGCCATTAGTGTTCATGTGTGCCTAGCCCAGAACAAGGCTGGGGACTTCCTGTACGTGCACAACCGAGCACGAGCCCAGGTGGGGGTGGGCCCACTGAAGTGGAACCAGAGTCTGGCGTCCTACGCGCAGCGCTACGCGAACAAGAGGAGCCATGACTGCAACCTGGAGCACTCGGGCGGGCCCTTCGGGGAGAACATCGCGGAGGGATACGAGGACATGAAGGGGTCGGACGCCGTCAAGTTCTGGCTAACGGAGAAGCCCAACTATGACTACCACTCTAACGCCTGCGTTAACGATGACTGCCTTCACTACACGCAGATCGTTTGGCGCAATTCACGTCATCTTGGGTCGGACTCATCTTTGGAGGATATTGTGAAATCCTTAGCCTTGAACACACAACAATTTCAAATGAGCACTCaacaatttcaaaatgaaactCGATCAAGCATTCAAAGTTTAGAAAGTCAAGTGAGCAAGCTAGCAACATCTATGAGTAAGCTGGAATCTCAAGGCAAACTCCCTTCTCAAACAGAGATGAATCCAAGGCAAAATGTTAGTGCCATTACTCTAAGAAGCGGAAGAGAGTTAGAAGAACCAATCAGGAAAAGAGACCGTGGGCACGGCTTAAATGCAGAAACTGAACCAGAAACAGAGGTTGTAATGAAGAAACCAGCTAAAGTTGTTCAAAATAAAGAGAAATCAAGTCCACTTGATGGCACTTTTAACATGGAGTTTGATGGAGAAATTGTAAAGTTCAATGCTATGAAGCGCCCAAATGAGATTTCCTCCGTTTGCAAGGTTGGTGTTATTAATCCCATAGTGCAAGAATCActtgaattacatcaacaaggcAAGTTGAGCAATTTGCTAAGTGAAAGCATTGATCAAGTTTGTTTAGAGAAGTCCAAAGAGAATATTGACAGTGATGATGTGCAAGAAGAAGTGGTGTATGAGCTGGAAGCTTTGAAACCCAAGCTTGGTGATCCCCCATCTCATGATTTAAATTCCTCTCATACTAATACTTCGCCACTTGTGATGCAAGAATCAGAGTTAAAGTTGAAACAACTTCCCAATTATCTCAAATATGCATTTTTGGAAGTTCAAGTGAAGGAAGAAAAGCTGATTCAGATGCTTGGAGAGTACAAAGAAGCTATAGCATATGTCAAGGATCTTAGCCTATCAACTTGTATGCAGAGAATTCCTCTTGGAGTGAATTATGATCCTATTCAAGAAGTGCAAAGACACTTTAATCCTCCAAGGATGGAAGTGTTCAAGAATGAATTTCAGAAGTTGTTAGATGCTGACATGATATATCTCAATTCAGATAGCAACTGGGTAAACCAAATGCAAGTGATGCCCAATGAAATAGGTACAGTGGTGGCAAATTCAGAATGGGTTGATTATCTGGCTCCAAAGCCACCTGACAAGGAGTAA 1479 0.4212 MRRSISNIVVVEVVLAISVHVCLAQNKAGDFLYVHNRARAQVGVGPLKWNQSLASYAQRYANKRSHDCNLEHSGGPFGENIAEGYEDMKGSDAVKFWLTEKPNYDYHSNACVNDDCLHYTQIVWRNSRHLGSDSSLEDIVKSLALNTQQFQMSTQQFQNETRSSIQSLESQVSKLATSMSKLESQGKLPSQTEMNPRQNVSAITLRSGRELEEPIRKRDRGHGLNAETEPETEVVMKKPAKVVQNKEKSSPLDGTFNMEFDGEIVKFNAMKRPNEISSVCKVGVINPIVQESLELHQQGKLSNLLSESIDQVCLEKSKENIDSDDVQEEVVYELEALKPKLGDPPSHDLNSSHTNTSPLVMQESELKLKQLPNYLKYAFLEVQVKEEKLIQMLGEYKEAIAYVKDLSLSTCMQRIPLGVNYDPIQEVQRHFNPPRMEVFKNEFQKLLDADMIYLNSDSNWVNQMQVMPNEIGTVVANSEWVDYLAPKPPDKE 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2836 492 MobiDBLite consensus disorder prediction 210 233 - -
Sto2g2836 492 PANTHER - 15 133 - -
Sto2g2836 492 Gene3D CAP 26 138 IPR035940 -
Sto2g2836 492 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 15 133 IPR001283 -
Sto2g2836 492 CDD CAP_PR-1 30 131 - -
Sto2g2836 492 PRINTS Allergen V5/Tpx-1 family signature 47 65 IPR001283 -
Sto2g2836 492 PRINTS Allergen V5/Tpx-1 family signature 93 106 IPR001283 -
Sto2g2836 492 PRINTS Allergen V5/Tpx-1 family signature 116 132 IPR001283 -
Sto2g2836 492 SMART SCP_3 26 149 IPR014044 -
Sto2g2836 492 Gene3D HIV Type 1 Reverse Transcriptase, subunit A, domain 1 401 483 - -
Sto2g2836 492 Coils Coil 165 185 - -
Sto2g2836 492 Pfam Cysteine-rich secretory protein family 32 131 IPR014044 -
Sto2g2836 492 SUPERFAMILY PR-1-like 28 131 IPR035940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2836 Sto-Chr2 41853994 41863465 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2836 K13449 - gmx:100499927 188.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g2836 2 41853994 41863465 Sto2g2836 2 41853994 41863465 ECH