Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2733 ATGGATCAATCAGATGCAAATTCAGCAAGTGTATCAATTCAGAAGGTTGCTTCAGCACAGTTCAGAAGACCTTCCCTTCATCTATTAGTAGAATCAcAAGCCAGAAAGAAATACCTCAGCCTATGTGTTCCCCTACACAAAGCAGCATTGCAGGGTGATTGCAAAGCAGTTCGGCATATCATTGAGCAGGATTCGGCCCTATTGAATGCTGCCATCACGAAAGGTTGGGCCACGGTTCTCCACGTAGCAGCCGGGGCGAACCACGTTCACTTGGTGGAAGAATTGGTGAAAATGATGGACAGAAGTGACTTGGAACTGCAGGACTACAAAGGGAACACGGCCTTCTGCTTCGCGGCCGCGGTCGGGAACATGCGAATCGCGCAGATAATGTTGAACGAAAACAAACTCTTGCCGACGATTCGGGGTGGAGAAGGAGTGACTCCTGTTCTCATTGCTGCTTTGCAAGGGCAGAGCGAGATGGCATTGGATCTTTACCCTAAAAGTGTGGAAATATTAGAAGAATGGGACAGGACATTGCTCTTCTTCACTTGTATCAGTACTGGAATCTATGAGTTAGCTTTAAAACTGGTAAATCAGTATCCAGAACTTGCTTTTGAACGTGATGATAACAACGAGACAGGCTTACATATCTTAGCCCGAAAGCCTTCGTGTTCCGATTTCCAGAGTCCGTTGTATCGAAAACAGATCATGAAATCCTGTAAAGGTGTGAAGCAAGACATGTGTCTTCAACTTGTAAGACGTCTTTGGAAAGAAATTCTTCTTCTGAATGACTCCAAAATGATGGAAGTCATAAGAGAGCCTTCACAAGTAATATTCTATGCAGCTGAAGTTGGAAACTTCGAATTCCTAGTGGAACTCATAAACACTTACCCTGATTTAATGTGGGAAGTAGATGGTAGAAACCGAAGTATGATCCACATTGCTGTTCTACATCGTCATGCTTGCATCTTCAATCTCATACATGAAATGGGTCCAATGAGGGACTTTGTTGTGTCTTCTGTGGATGATGTTGATCAAAACAATTTATTGCATTTTGCTGCAAAACTAGCACCACAAGATCGGCTTAATATGGTTTCTGGAGCAGCTTTTCAAATGATGCTTGAGCTTTTATGGTTTGAGGAGGTGAAAAAGGTAATGCATCTATCATTCATAGAAATGAAAAACTCAGAAGGCATAACTCCTCGTCAATTATTCACCATAGAACACGAAGAATTACTGAAAAAAGCAGAATCCTGGATGAAACGAACCGCAAATTCTTGTATGGTTGTTTCTACACTTATCACCACAGGAGTTTTTTCTGCTGCATTTAGCCTCCCAGGTGGCAACAATGACAATACAGGAACTCCAAATTATTTGGAAAAATCATCGTTTTTGATATTTGCTGTATCGGATGCAATCGCACTTATCTCATCCTCAACCTCCATCCTGATCTTCTTATCGATCCTCATCTCGCGATACGCCGAAGAAGATTTCCTCAAGTCACTACCTTTGAAGTTGATTTTTGGGTTAGTGGCATTATTTTTTTCCATTATAAGCATGATGGTAGCATTTAGTAGCGCTTTTTTTATAACTTATTACCATGGGATAAAGTGGGTTCCTAGCTTCATTTCTGTGCTTGCATTTGTACCTATACCTTTGTTTGTATTTCTACAATTTCCCCTTTGGTCGGATATACTTTACACCACTTATTTTTGTAAGTCTCTATTTCGACCCAATAAATATATTGTTTATTAA 1755 0.4091 MDQSDANSASVSIQKVASAQFRRPSLHLLVESQARKKYLSLCVPLHKAALQGDCKAVRHIIEQDSALLNAAITKGWATVLHVAAGANHVHLVEELVKMMDRSDLELQDYKGNTAFCFAAAVGNMRIAQIMLNENKLLPTIRGGEGVTPVLIAALQGQSEMALDLYPKSVEILEEWDRTLLFFTCISTGIYELALKLVNQYPELAFERDDNNETGLHILARKPSCSDFQSPLYRKQIMKSCKGVKQDMCLQLVRRLWKEILLLNDSKMMEVIREPSQVIFYAAEVGNFEFLVELINTYPDLMWEVDGRNRSMIHIAVLHRHACIFNLIHEMGPMRDFVVSSVDDVDQNNLLHFAAKLAPQDRLNMVSGAAFQMMLELLWFEEVKKVMHLSFIEMKNSEGITPRQLFTIEHEELLKKAESWMKRTANSCMVVSTLITTGVFSAAFSLPGGNNDNTGTPNYLEKSSFLIFAVSDAIALISSSTSILIFLSILISRYAEEDFLKSLPLKLIFGLVALFFSIISMMVAFSSAFFITYYHGIKWVPSFISVLAFVPIPLFVFLQFPLWSDILYTTYFCKSLFRPNKYIVY 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2733 584 SMART ANK_2a 75 106 IPR002110 GO:0005515
Sto2g2733 584 SMART ANK_2a 307 338 IPR002110 GO:0005515
Sto2g2733 584 SMART ANK_2a 110 140 IPR002110 GO:0005515
Sto2g2733 584 SMART ANK_2a 40 70 IPR002110 GO:0005515
Sto2g2733 584 SMART ANK_2a 144 173 IPR002110 GO:0005515
Sto2g2733 584 Pfam Domain of unknown function 418 530 IPR026961 -
Sto2g2733 584 Gene3D - 25 255 IPR036770 -
Sto2g2733 584 PANTHER CASKIN 9 584 - -
Sto2g2733 584 SUPERFAMILY Ankyrin repeat 44 219 IPR036770 -
Sto2g2733 584 Pfam Ankyrin repeats (3 copies) 45 132 IPR002110 GO:0005515
Sto2g2733 584 PANTHER ANKYRIN REPEAT PROTEIN 9 584 - -
Sto2g2733 584 Gene3D - 272 414 IPR036770 -
Sto2g2733 584 SUPERFAMILY Ankyrin repeat 277 357 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2733 Sto-Chr2 41048384 41053618 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g2733 30 549 Miscellaneous Gene Families AT3G12360 21.109 2.88e-16 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2733 - - gmx:100814409 695.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g2733 2 41048384 41053618 Sto2g2733 2 41048384 41053618 ECH