Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g1446 ATGGAACTCAAACTCTTAAAGAACATCGTGGCTTGCTGTTTCGTGCAAGGAGCACATCAGTTACCATGTAGCTTTTCAGCATCATCACTGCCCCTTACTGAAGAAAACATAGGGAGCAAACAGAAGGATGACGCTGTAAGTGGAGATTCCATTCGCCATAAATTTCTTACTTTTTATGCTTCCCGCGGTCACAAGGTCCTTCCAAGTTCTTCTCTGGTTCCAGATGATCCCACAGTTCTCCTAACTATAGCAGGAATGCTTCAATTCAAGCCTATATTCCTAGGGAAGGTTCCAAGGGAAGTACCTTGTGCAACAACTGCACAGAAGTGCATACGTACTAATGACGTGGAGAATGTTGGCCGAACAACTCGACACCAAACATTTTTTGAGATGCTTGGAAACTTCAGCTTTGGTGATTACTTCAAAAAAGAAGCAATTAAATGGGCGTGGGAGCTTTCAACCATAGAGTTTGGTTTGCCAGCAGACAGATTATGGGTTAGTGTTTATAAAGACGATGATGAGGCTTTTGCAATTTGGTCAGATGAGGTAGGTATACCAGTTATGCGTATAAAGAAGTTGGGTGATGAGGACAACTTTTGGACCAGTGGAGTGACTGGTCCTTGTGGTCCTTGCTCAGAAATCTATTATGATTTTCATCCAGAGAGAGGATATGAAGATGCTGATCTCGGTGATGATACAAGGTTCATAGAGTTCTACAATCTAGTTTTCATGCAATACAATAAAAAGGATGATGGTTCTCTTGAACCTCTAAAGCAGAAAAATATAGATACTGGGCTTGGCCTGGAGCGTTTGGCTCGCATCCTTCAAAAGGTTCCAAACAACTATGAAACTGACTTGATTTATCCCATCATAAAGAAAGCATCTGAATTAGCAAATGTTTCATATGTCGTTGCTGATGATCAGACAAAGATGAATTTGAAAatTATAGGAGATCACATGCGAGCTGTTGTATATCTCATATCTGATGGGGTTGTTCCATCAAATATTGGGAGAGGTTATGTAGTTCGGCGTCTTATCAGAAGGGTTGTCCGTACAGGAAGATTGCTTGGTATAAAAGGTGATGGTTTGGGAAACCCTGAAGGAGCATTTTTACCAGCCATTGCTGAGAAAGTAGTGGAATTAAGCTCTCTTATTGATCCTGATGTGAAGAACAGAGCACCCCGTATCTTTGAGGAGTTGAAGAGAGAAGAACTTAGGTTTGTGCAGACACTGGAGAGAGGAGAAAAGTTACTTGAAGAGAAGCTTGCTGATGCTTTATCAAGTGCAGAAAAAAATCAAACTGTACCTTGCTTGTCTGGTGAAGATGTGTTTCTTTTGTATGATACTTTTGGGTACCCTGTGGAAATAACAAAAGAAGTGGCTGAAGAACGTGGTGTGAGTTTTGATATTAATGGTTTTGATACTGAGATGGAGAAGCAAAGGCGTCAATCTCAGGCTGCACATAATACTGTCAAACTCGCCATGGGAAATGGAGCAGATATTGCAGAAAATGTATCTGACACAGAATTTATTGGATATGACAGCCTTTATGCTAAAGCTGTAGTAGAAAGCCTTGTGGTGAATGGTGATCCAGCAACACTGGCCAGTGAGGGTAGTAATGTGGAAGTTTTGCTCAACAGGACTCCATTTTATGCAGAATCAGGTGGACAAATTGGAGATCATGGTTTTCTATTTATTCAGGATGGTGAAGATCAACCAAAAGCTGTTGTGGAGATAATAGATGTTCAGAAGTCGTTAGGTAATAAATTTGTTCATAAGGGAACAGTCCGAGAGGGATTTGTAGAGGTCGGCAAAGAAGTGGAAGCAGCAGTGGATGTAAAACTGAGGCAGCGAGCTAAGGTTCATCATACTGCAACTCATTTACTACAAGCTGCACTTAAAAAGGTTATTGGTTCAGAGACTTCACAAGCTGGTTCTTTGGTGGCATTTGATCGCCTTCGGTTTGACTTCAACTTCCATAGACCACTTCTTGACAGTGAGCTTGCAGAAATTGAAGGACTAATCAATGGATGGATTGAAAATGCAACACTTCTTCAAACCAAAGTGATGCCTCTAGCTGATGCAAAACAAGCTGGAGCTATAGCAATGTTTGGAGAAAAATATGGAGAAGAGGTACGTGTTGTAGAGGTTCCAGGTGTATCCATGGAACTTTGTGGAGGAACCCATGTCCATAATACATCTGAAATTCGTGGTTTTAGGATAATCTCGGAGCAGGGTATTGCATCTGGAGTCAGGCGTATAGAAGCTGTAGCTGGAGAAGCTTTTATTGAATATGTCACTGCCAGGGATTCTTTTATTAAGCAACTATGTTCCACTCTCAAAGTGAAACCTGAAGAAGTGACAAAAAGGGTAGAAAACCTCTTAGAGGAGTTACGGGAAGCCAAAAATGAAAATTCTGCTTTGCGCGCCAAAGCAGCAGTCTACAAAGCATCAGTTATAGCGAGCAAAACATTACTAGTGGGTAATTCAAAACACTTCAGGGTACTAGTTGAATGCTTGGATGATGTTGATGCTGATTCACTAAAAAGTGCTGCAGAATATTTGATGGAAACACTACCAGATCCAGCAGCAGTGATATTGGGGTCAAGTCCAGGTGAAAATAAGGTTAGTCTGGTTGCTGCATTCACTCCAGGGATTGTAGATCAGGGACTTCAGGCAGGTAAGTTTATAGGGCAGATAGCAAAACTATGTGGTGGGGGAGGGGGAGGGAGGCCCAATTTTGCTCAAGCTGGCGGGAAGAAGCCAGAGAATTTGGCAAGTGCCCTTGAGAAGGCCCAATCAGAACTCaaaagaacaagTGACTCACACTAA 2832 0.4174 MELKLLKNIVACCFVQGAHQLPCSFSASSLPLTEENIGSKQKDDAVSGDSIRHKFLTFYASRGHKVLPSSSLVPDDPTVLLTIAGMLQFKPIFLGKVPREVPCATTAQKCIRTNDVENVGRTTRHQTFFEMLGNFSFGDYFKKEAIKWAWELSTIEFGLPADRLWVSVYKDDDEAFAIWSDEVGIPVMRIKKLGDEDNFWTSGVTGPCGPCSEIYYDFHPERGYEDADLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERLARILQKVPNNYETDLIYPIIKKASELANVSYVVADDQTKMNLKIIGDHMRAVVYLISDGVVPSNIGRGYVVRRLIRRVVRTGRLLGIKGDGLGNPEGAFLPAIAEKVVELSSLIDPDVKNRAPRIFEELKREELRFVQTLERGEKLLEEKLADALSSAEKNQTVPCLSGEDVFLLYDTFGYPVEITKEVAEERGVSFDINGFDTEMEKQRRQSQAAHNTVKLAMGNGADIAENVSDTEFIGYDSLYAKAVVESLVVNGDPATLASEGSNVEVLLNRTPFYAESGGQIGDHGFLFIQDGEDQPKAVVEIIDVQKSLGNKFVHKGTVREGFVEVGKEVEAAVDVKLRQRAKVHHTATHLLQAALKKVIGSETSQAGSLVAFDRLRFDFNFHRPLLDSELAEIEGLINGWIENATLLQTKVMPLADAKQAGAIAMFGEKYGEEVRVVEVPGVSMELCGGTHVHNTSEIRGFRIISEQGIASGVRRIEAVAGEAFIEYVTARDSFIKQLCSTLKVKPEEVTKRVENLLEELREAKNENSALRAKAAVYKASVIASKTLLVGNSKHFRVLVECLDDVDADSLKSAAEYLMETLPDPAAVILGSSPGENKVSLVAAFTPGIVDQGLQAGKFIGQIAKLCGGGGGGRPNFAQAGGKKPENLASALEKAQSELKRTSDSH 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g1446 943 SUPERFAMILY Translation proteins 507 611 IPR009000 -
Sto2g1446 943 SUPERFAMILY Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 283 491 IPR018162 GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419
Sto2g1446 943 Gene3D - 759 820 - -
Sto2g1446 943 PANTHER ALANYL-TRNA SYNTHETASE 47 935 - -
Sto2g1446 943 Gene3D - 683 736 - -
Sto2g1446 943 Hamap Probable alanine--tRNA ligase, chloroplastic. 38 942 IPR027522 GO:0009507
Sto2g1446 943 Pfam Threonyl and Alanyl tRNA synthetase second additional domain 712 755 IPR012947 GO:0004812|GO:0005524|GO:0043039
Sto2g1446 943 TIGRFAM alaS: alanine--tRNA ligase 51 919 IPR002318 GO:0000166|GO:0005737
Sto2g1446 943 PANTHER ALANINE--TRNA LIGASE, MITOCHONDRIAL 47 935 - -
Sto2g1446 943 Pfam DHHA1 domain 791 934 IPR003156 GO:0003676
Sto2g1446 943 PRINTS Alanyl-tRNA synthetase signature 114 125 IPR002318 GO:0000166|GO:0005737
Sto2g1446 943 PRINTS Alanyl-tRNA synthetase signature 236 247 IPR002318 GO:0000166|GO:0005737
Sto2g1446 943 PRINTS Alanyl-tRNA synthetase signature 263 276 IPR002318 GO:0000166|GO:0005737
Sto2g1446 943 PRINTS Alanyl-tRNA synthetase signature 314 330 IPR002318 GO:0000166|GO:0005737
Sto2g1446 943 PRINTS Alanyl-tRNA synthetase signature 338 351 IPR002318 GO:0000166|GO:0005737
Sto2g1446 943 Gene3D - 622 757 - -
Sto2g1446 943 SUPERFAMILY Class II aaRS and biotin synthetases 48 282 IPR045864 -
Sto2g1446 943 Hamap Alanine--tRNA ligase [alaS]. 47 940 IPR023033 GO:0004813
Sto2g1446 943 Gene3D - 498 611 - -
Sto2g1446 943 CDD AlaRS_core 49 278 - -
Sto2g1446 943 Pfam tRNA synthetases class II (A) 51 613 IPR018164 GO:0000166|GO:0004813|GO:0005524|GO:0006419
Sto2g1446 943 Gene3D - 828 936 - -
Sto2g1446 943 SMART tRNA_SAD_4 712 755 IPR012947 GO:0004812|GO:0005524|GO:0043039
Sto2g1446 943 Coils Coil 784 818 - -
Sto2g1446 943 Gene3D Bira Bifunctional Protein; Domain 2 46 279 IPR045864 -
Sto2g1446 943 ProSiteProfiles Alanyl-transfer RNA synthetases family profile. 46 768 IPR018165 GO:0003676|GO:0004813|GO:0005524|GO:0006419
Sto2g1446 943 SUPERFAMILY ThrRS/AlaRS common domain 611 768 IPR018163 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g1446 Sto-Chr2 15670628 15677344 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g1446 K01872 - gmx:100817906 1507.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g1446 2 15670628 15677344 Sto2g1446 2 15670628 15677344 ECH