Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g1377 ATGGACCTCCAGTCGCATAATGCTCTTCCTGCCCCCCTTGACCATACTGTCTCCCCAATGGCCCATGCTTCTAGTTCGGCGTCAGCAGCGCCACAGTTCCTTCTGCCTCGTCAAGGTCCGCTTCTTGAACTCCACGATGAGTATATTGCTTATCGTAGAGCGAAGTGGTCACGTAACGTGGTGGCAACATTGATTGACTGCAAGGACCTGCCTATCTTTCGCCTTCAAGCCATTATAGATGGTAACTGGAATCTCCAAGATCATGTACTGGTTAAatctaaatttaataatacttttattcTGGAATTTGCGAATGGGGAGGATAAGCAGTTTATGTTATCTAATGGCCCTTGGGCCGTACAGCAATCTCTGCTTGTTTTAGATGATTGGCAGCCTGATACGCCGGTGGAAAGTCTGGAGAAGGAAAGAATTGAGGTGTGGTTCAGAATCTCCGGCGTGCCATTGGAGTTCATGTGCAACAGCTTTGCTAAACTTATTGGTGATATTATTGGTGGCACTGTGAAACTCGACCCGCAGAATGATGCAGGTGAAAACTTGTCCTTCCTCAGAGTTAAAGCATCACTTGACAAGAATAAACCGTTATTCATGGGTGCCTTTTTATCTACGGAGTTTGGGGAGAAAATATGGATATCATGCACTCCGGAACGGACCTATCGCGTATGTGAGCAATGTGGTAGGATTGGTCATCTCCCCAAGGAGTGTAAGTGGGATGTTTTTGTCACTCTAGCCGCCATGCAGCAGCAACGCCAAAAGATCCAGGCGGCTTTTGGAACTGCCTTCTGGATGCAACCCTTATTTGTTCATTTCCAATGTCCTCAAAGGAAATCAGAGCACTGGCATTTTCTGAAAACTACCAAGGTGCATGCTGAGTTTCATGAATTTGGAGTCAAATATGTCGTCACAGATCTCAAGAGTGAGCACATTTCCTCCAATATGATCTCGGCTGAATGGTCATCTTCGGATTCTTCTGATTCTGATGATGACTCTCCACCATCCCTTGGGGAAGATATGGACACAAAACCGTTGCCGGAATATCACTCCGAACCATCGGATCATGGAGCTGCAACAGATGACAGACACGTGGATCCGATGGCCATAAGTCACATGCAAGTTGATAATCCTCTTTTATCCTTGGCAGGTGCTTCTCAAGTGCATCATGACGTCATGCTGGGTAATTCCTTATCCTCTGCAGGGGCATTAAATGCAGGAGATTTTCCCAATCTTGAGCAGGTTACCCAGATGCAGGAACTAGAAATTGGTAATTTAATTGTAGCAACTATGCCAAGCCCTAATCGGATGTCTGGTGACCTGATGGATCTGATTACCCCTCACGTGTCTTCCATTGACCCACATGATCAGGCGCCACCTCAGCTACAACTAAAGGGTTCTGTTCCTCATGCCTTAAATTTAGATATCCATCCTCAACCTCTTTTGGGCTCTCCATCCTTTGAGCCCATTTCGTTGTTCACTGGTTCTTCCTGGCCTCCGTCCTTTTTGGGCCGTGTTTATTCTACATATGAAATAATTCTTTGGGCTACTCATACAAATAGTGTTGTTGGGCCTCAACAATTGAGCCAAGCGGGTACTGGGCCTCCCACTATGGACTTTACAAATGGTGCTGTTGGGCCTGAACAATTGAGCCAAGCGGGTACTGGCCCTCCTGCTATGGACTTTACTCCTTTCCAGCTGTccacagaaatggaaatgatgtTCTCTGATCAGTATATGGGCTGGCATTATGAATCGAACACTCCGAACTTCAGTGACCCCTCATACGCTTTGGCCACTGCTTCTCTTCAGCATGGTTTGGGACTGGCGTTGATTATGCATACTTCGTATTCTGATGGTCTTCAATGGGACTCCTTCCCTGTACAGTTGGAACGAATGGCCAGTTGGCATCTCATCAATCATTTCTTCATTGCGGTACCTGGTGTTCAAGGTCCTTTTGTTCTATCGCCCTTCCACCCCCTGTTTTGCTTCTCCTTTTGGTCTTCTCAAATGAGCGGGTGGTCCTTCTCTAAGGTCATGCCTCCTCCTGGGGTTATGATCATAGAGGTTGACGAAGAAGACAGTGGTATTACTGGTAAGCGCAAGGTATCTCCGGGTTGCCTAATTCCGTATAAAAAGCGACGTTTTCACATTGGTTCAAACATTCCCCTGTTTCGGAAATGGAAAACTGTGCCTGACTCAAACTTGAAGATGGTATCTGTCCTAGCTGTGGCCAGAAAGAAGATTCGATCGAAAGCGTTTCTCGAACTGCAGATACAGGTTCAAGCTTCGGTGAACAAGCTGATAGATGAAATAACTAATGAAATGAAGGGTGAAATGGAGGCTAGCCCTGGAAGGCCTCCACaaactaAACGCAAGCTCTCTTATGTTGCCCCTATTTTGAAAGGAATGGGATACATTTCCTTTTGTGGCACTGACCCAGTTGGTAAAAGTGGTGGTACCTTTTTAGCTTGGCATTCCTCTTTGAAATGTGAAGTCCAAGAGGTCAGTCCTCACTTTGTTCATGTGTTATCTGAAGATTTTAATCGCAACCCTATTTGTATTACCTTTGTTTATGGTTACCCTGAAGTCGAGCATCGTCATCTTCTTTGGACTTGGTTTCTGTCTATGTCACATACTATTTCCATTCCCTGGGTGGCTTTGGGAGACTTTAATCAAATTCGTAATTTAGGGGAAAAAGATAGCAGTTCCAGCAGACGCAAAGGCAATCATGTAGTTTGGGAACGGTTAGATCGTGCTCTATGTACTGGTAGTTGGTTGTATAGTTTCCCTCACTCTGTACTCTTTTCCTTCCCTATTGTAGCGTCGGATCATGCCCCTATTATGGTAGATTGTTTTTCTGAGGTGTGGCATAAGGAGTTTAGGGGTTCCCCTGCTTTTGTAGTGCAGAAGAAACTGTCTTTGTTAAGCACTGAATTAAAAAAGTGGAACAAATTAGAGGGCCAATGGGTCTCTAATTATGAAGAAATCGAGGAAATGGGTATTCAATATTTCTCGGAGATTTTTACAGATGCTAATCCGGTCAGTAGTGCGCAGATTCTTCACCAACTTCACAATTATGATCTTCCCCAGCTGACCAACCAACAGAGCAACTTTTTGTCTAAACCATTTTCAGCAGAGGAAATCACAATGGCTTTTCAGCAGATGAAATTGGATAGTGCCCCAGGTCCTGATGGTATGAATTGTCGTTTCTTTAAGACGTTTTGGAGTGAGGTTGGTTCTGATGTTATTGCTATGGTACAATCCTTTCTCCGAGGGGGCTATATGCTTAAAGAACTGAACCAATCATTTATCACTCTAATTCCAAAGTCTGCTTCAACCCAGAATTTTCACGACTATAGACCCATCAGCTTGGCCAATGTCACGTATAAATTGATTTCAAAAACTCTTTGCAATCGTTTGAAAACGGTTCTTCCTGAGGTTATTGCTCCCAATCAGAGTGCTTTTCTCAAAGGGCGTCTTATCTCTGATAACATTCTCCTTGTTAGTGAGCTTCTCAAAAAGATCAATGGCACTCGGCGAGGCAAGACTAGTTGGTGTGCACTGAAACTGGATATTAAGAAAGCATATGATAAGCTCTCTTGGAATTTTATTGAAGCTGTTCTCCGTCGAATGCAGTTCCCGACTCACTGGATACAGCTTATCATGCAGTGTGTTTCCACTGTGTCCTATAATCTTGTTCTCAATGGTGGTATCTCCAGAAAATTTTATCCTTCTTGTGGTATCCGTCAAGGGGACCCTCTTTCCCtttatctttttattctttGTGCCAACATTCTTTCCTCTCTGATTGCTCGGGAGGAGGTTAATGGTCTTTGGAAAGGAATTAAAATAGGGAGAGGCGTCTCGGCCATCACTCACCTCATGTATGCTGATGACACGGTTTTGTTCTTCCAATTATCTCCACATAACATTGCTGTTGTCCAAAGGGTTATCTCCAAGTATTCTGAGCTATTAGGTCAGCAAATGAATTTAAGCAAGTCTCTTCTTATTTTCAGTCCCAATACTCCCCACAGGCTTAAAAGAGAAGTCTCTTCATCTATGGGGATCCGGTTTGCTTCAAAACTTGGTAAGTACCTGGGTACTTGGGTTGATAATCATTTGAGCAAGAAGGAAGCTTTTGAGGATGTTTTAAACAAGATTCATAGTAAACTCCAACTTTGGAAATCTAAATGTTTATCTCAGGCTGGCAGAATGACTCTTATTAATTCGGTAATAAGTTCTTCGCTCATCTACCCTCTGTCTCATCATTGTTTTACCTTGCAACAATGTCGTCAACTGGAACAAGTTATggcaaattttttttggggtttcTCTGGAGATAAGTTAAAGATGCATCTTCAAAACTGGTCTTCTTTGTGTCAACCTAAGACTTTGGGGGGTCTGTCCTTTCGCAAGATAGATCTGCTTAATAATTCCTTGTTGGCTAAGCATTTGTGGAGGGTTCTATCCCGTCATCATTCCTTATCTAGTTTATGTTTGTCTCAAAAGTATTCCAATGCGGTGCATCCCGGTGTGCTTCTTCCCCGCTCTACTGCGTCTCCTTTATGGAAGGGTATCGTCAAATCTGGGTCTATTGTTTTGGATCATCTGTGTTGGCAAGTAGGCACTGGTACTGCTATTCATATCAACCACCCTTTATGGTGGCCAATGCTTCGAGATCATGACGGTGTTGCCAAGATCCCTCTCTCCACTACTTCGGTGCAGGATAGACTTCGCTGGAAGCTTTCTCGGGAGGGTACTTATAATGTTAAGGATTCTTACCTGTCTCTTCTTCTTCAAGGTACTAACTCAGCTAATGGACGTGGTACTCATTCGGCTAACTGTAAAGTGTGGAAGGTTTTGTGGCGTTTGAAGCTTCCGTTGCGTATGATTGTTTTTCTGTGGCGATTTCTCTGTAACAATTTGCCTAACTTGGTGACTCTAAGAGCCCATCATCTTCCAGTGGATACCCTGTGTGATATCTGTCAGCAAGAGGAAACTTTGTCTCATGTTTTCTTCGGCTGTCAATTTGCTCGAGCAGTCTGGTTTGGCACTCACCTATCCTTGCGTCCTAATTTACTGCCTACAACGAATGTTATTGCTTGGTTCAGGAGTGAACTTGTCAATTCTGGTGTTACTCATCATGCTCATGATGGTCTTCGCTTTATTTGTATCACTCTTCATTCTCTATGGTATTCCCGTAATCAACGTGTGATGGAAGGCAAAATCTCCCTTCCTTCTGATTGCTTAGCTCAGGTTTATCGGGTGTGGTGGAGAATAGTGGAAGGACAGTCTTTACTGCTCGGTGCTGCTCAACCTGGAGCCTCGCTTCCTCAAGATACTACTCAGCCATTGCCTCCTCACGACATCGTCTTAAATGGTTTACATTCTTGGGACTGGATGGTGGTTGGTTTTTATAAATCTCTCGAAAGCCACTCTAAGTCTCCTTCTTGCTTCCTGATCTCAACTGTGGTTTTCTGGCACCAACAACCTTTTGCTCGGTTTGACACCAGGGTTCCTAATTGGAATCAATGCTTTCCGTCCTTCCTTTCTCTGATTCGAAAAAGCCTTCATGTGGTGAATCACAATGGTCCTCCTCCCATATGTTGCCATCTGTTTGTCCCCAACTTAGTCTTTAATACTCTTCTTCTTGGGGGCTATCAGAAGTATCATAATTGCCAAGTCTTCGGCCAGGACATTTGTAACATTATTAGTAATTTTCAAGGCTTTAAGGGTGCTCAATGCTCAGTGGAACTGAGCATCCTTACTACACAGGTGGTTGAAACACCTGTGCCCTTGATGCCCGTGTCCAAACAGGCACGGGCACCAAGCCCCAAAGGTGTTTGGGCTGGTAGCCGAAACATCTGCAgggctattaaaaaaaagAGAAAGCAATTTTGCTGCTCATGTTGTTGCTACTTGCCTGTGAATTTCGTGattagacctgatcacggGATGCCCGCTCAGCTCACAGCACCTTCTAGAATACAACGCAGTTACCTCACCACAAAACATTGTGCTGCTGCAAGCACCCAACTACCATTATCATGGCGTCGCGCTGTATCGCCCGACACACTCCTGCTTCTCCCTTCTCTTTCCCTTCCTCCTTCTACTGGAGGAAGATTGCATAAAGACCCTGTGGTGAAATGCACAGCGCAGGTGAATCTCGCTCCTGGGACTCCCGTTAGGCCGACCAGTATACTGGTGGTTGGTGCTACCGGCACTCTGGGAAGGCAGGTTGTGAGGCGGGCTCTTGACGAAGGTTACGATGTGAGATGCCTCGTGAGGCCTAGGCCTGCTCCTGCTGATTTCCTTCGCGATTGGGGAGCCACTGTCGTCAACGCAGACCTTAGTAAACCAGAGACTATTCCTGCAACGTTGGTTGGAATACATACAGTAATCGACTGTGCCACTGGACGACCAGAGGAGCCCATTAAAACCGTAGACTGGGAAGGAAAAGTTGCTCTTATACAATGTGCAAAAGCAATGGGGATTCAGAAATATGTCTTCTATTCCATCCATAACTGCGATAAACATCCAGAGGTTCCTCTTATGGAGATCAAGTATTGCACCGAGAAGTTTATCCGTGATTCTGGCCTGAATCATGTCATAATCCGGTTATGTGGTTTCATGCAAGGTCTTATTGGGCAGTATGCCGTTCCTATCCTGGAAGAGAAATCTGTTTGGGGTACCGATGCCCCAACAAGAATTGCTTACATGGATACTCAGGATATAGCTCGCTTGACACTTATAGCCCTAAGGAATGAGAAAATAAATGGGAAACTTCTTACATTTGCTGGTCCTCGTGCATGGACAACCCAAGAGGTGATAACGCTGTGTGAGAGGCTTGCAGGTCAAGATGCTAATGTAACTACAGTTCCAGTCTCCATTTTAAGACTCACTCGTCAATTGACACGGTTTTTTGAATGGACAAATGATGTTGCTGACAGATTGACTTTTTCGGAGGTGCTTACAAGCGACATTGTTTTCTCTGCTCCAATGGGAGAGACATATGATCTTCTTGGCGTGGATCAGAAAGATATAGTTACATTAGAGAAGTATTTGCAGGATTACTTCACAAACATATTGAAGAAATTGAAGGATCTTAAAGCACAGTCAAAGCAAACGGATATTTACTTCTGA 7155 0.439 MDLQSHNALPAPLDHTVSPMAHASSSASAAPQFLLPRQGPLLELHDEYIAYRRAKWSRNVVATLIDCKDLPIFRLQAIIDGNWNLQDHVLVKSKFNNTFILEFANGEDKQFMLSNGPWAVQQSLLVLDDWQPDTPVESLEKERIEVWFRISGVPLEFMCNSFAKLIGDIIGGTVKLDPQNDAGENLSFLRVKASLDKNKPLFMGAFLSTEFGEKIWISCTPERTYRVCEQCGRIGHLPKECKWDVFVTLAAMQQQRQKIQAAFGTAFWMQPLFVHFQCPQRKSEHWHFLKTTKVHAEFHEFGVKYVVTDLKSEHISSNMISAEWSSSDSSDSDDDSPPSLGEDMDTKPLPEYHSEPSDHGAATDDRHVDPMAISHMQVDNPLLSLAGASQVHHDVMLGNSLSSAGALNAGDFPNLEQVTQMQELEIGNLIVATMPSPNRMSGDLMDLITPHVSSIDPHDQAPPQLQLKGSVPHALNLDIHPQPLLGSPSFEPISLFTGSSWPPSFLGRVYSTYEIILWATHTNSVVGPQQLSQAGTGPPTMDFTNGAVGPEQLSQAGTGPPAMDFTPFQLSTEMEMMFSDQYMGWHYESNTPNFSDPSYALATASLQHGLGLALIMHTSYSDGLQWDSFPVQLERMASWHLINHFFIAVPGVQGPFVLSPFHPLFCFSFWSSQMSGWSFSKVMPPPGVMIIEVDEEDSGITGKRKVSPGCLIPYKKRRFHIGSNIPLFRKWKTVPDSNLKMVSVLAVARKKIRSKAFLELQIQVQASVNKLIDEITNEMKGEMEASPGRPPQTKRKLSYVAPILKGMGYISFCGTDPVGKSGGTFLAWHSSLKCEVQEVSPHFVHVLSEDFNRNPICITFVYGYPEVEHRHLLWTWFLSMSHTISIPWVALGDFNQIRNLGEKDSSSSRRKGNHVVWERLDRALCTGSWLYSFPHSVLFSFPIVASDHAPIMVDCFSEVWHKEFRGSPAFVVQKKLSLLSTELKKWNKLEGQWVSNYEEIEEMGIQYFSEIFTDANPVSSAQILHQLHNYDLPQLTNQQSNFLSKPFSAEEITMAFQQMKLDSAPGPDGMNCRFFKTFWSEVGSDVIAMVQSFLRGGYMLKELNQSFITLIPKSASTQNFHDYRPISLANVTYKLISKTLCNRLKTVLPEVIAPNQSAFLKGRLISDNILLVSELLKKINGTRRGKTSWCALKLDIKKAYDKLSWNFIEAVLRRMQFPTHWIQLIMQCVSTVSYNLVLNGGISRKFYPSCGIRQGDPLSLYLFILCANILSSLIAREEVNGLWKGIKIGRGVSAITHLMYADDTVLFFQLSPHNIAVVQRVISKYSELLGQQMNLSKSLLIFSPNTPHRLKREVSSSMGIRFASKLGKYLGTWVDNHLSKKEAFEDVLNKIHSKLQLWKSKCLSQAGRMTLINSVISSSLIYPLSHHCFTLQQCRQLEQVMANFFWGFSGDKLKMHLQNWSSLCQPKTLGGLSFRKIDLLNNSLLAKHLWRVLSRHHSLSSLCLSQKYSNAVHPGVLLPRSTASPLWKGIVKSGSIVLDHLCWQVGTGTAIHINHPLWWPMLRDHDGVAKIPLSTTSVQDRLRWKLSREGTYNVKDSYLSLLLQGTNSANGRGTHSANCKVWKVLWRLKLPLRMIVFLWRFLCNNLPNLVTLRAHHLPVDTLCDICQQEETLSHVFFGCQFARAVWFGTHLSLRPNLLPTTNVIAWFRSELVNSGVTHHAHDGLRFICITLHSLWYSRNQRVMEGKISLPSDCLAQVYRVWWRIVEGQSLLLGAAQPGASLPQDTTQPLPPHDIVLNGLHSWDWMVVGFYKSLESHSKSPSCFLISTVVFWHQQPFARFDTRVPNWNQCFPSFLSLIRKSLHVVNHNGPPPICCHLFVPNLVFNTLLLGGYQKYHNCQVFGQDICNIISNFQGFKGAQCSVELSILTTQVVETPVPLMPVSKQARAPSPKGVWAGSRNICRAIKKKRKQFCCSCCCYLPVNFVIRPDHGMPAQLTAPSRIQRSYLTTKHCAAASTQLPLSWRRAVSPDTLLLLPSLSLPPSTGGRLHKDPVVKCTAQVNLAPGTPVRPTSILVVGATGTLGRQVVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGIHTVIDCATGRPEEPIKTVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEKFIRDSGLNHVIIRLCGFMQGLIGQYAVPILEEKSVWGTDAPTRIAYMDTQDIARLTLIALRNEKINGKLLTFAGPRAWTTQEVITLCERLAGQDANVTTVPVSILRLTRQLTRFFEWTNDVADRLTFSEVLTSDIVFSAPMGETYDLLGVDQKDIVTLEKYLQDYFTNILKKLKDLKAQSKQTDIYF 2384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g1377 2384 MobiDBLite consensus disorder prediction 346 365 - -
Sto2g1377 2384 CDD SDR_a5 2071 2273 - -
Sto2g1377 2384 SUPERFAMILY DNA/RNA polymerases 1041 1341 IPR043502 -
Sto2g1377 2384 SUPERFAMILY DNase I-like 798 954 IPR036691 -
Sto2g1377 2384 Pfam Reverse transcriptase (RNA-dependent DNA polymerase) 1111 1372 IPR000477 -
Sto2g1377 2384 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2071 2337 IPR036291 -
Sto2g1377 2384 Gene3D - 2070 2333 - -
Sto2g1377 2384 CDD RT_nLTR_like 1106 1374 - -
Sto2g1377 2384 Gene3D Endonuclease/exonuclease/phosphatase 791 955 IPR036691 -
Sto2g1377 2384 Pfam NmrA-like family 2071 2292 IPR008030 -
Sto2g1377 2384 MobiDBLite consensus disorder prediction 321 365 - -
Sto2g1377 2384 Pfam zinc-binding in reverse transcriptase 1615 1686 IPR026960 -
Sto2g1377 2384 ProSiteProfiles Reverse transcriptase (RT) catalytic domain profile. 1092 1362 IPR000477 -
Sto2g1377 2384 ProSiteProfiles Zinc finger CCHC-type profile. 228 242 IPR001878 GO:0003676|GO:0008270
Sto2g1377 2384 PANTHER - 2017 2384 IPR044256 -
Sto2g1377 2384 Pfam Domain of unknown function (DUF4283) 54 192 IPR025558 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g1377 Sto-Chr2 14915115 14927237 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g1377 - - pop:18102176 660.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g1377 2 14915115 14927237 Sto2g1377 2 14915115 14927237 ECH