Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g1101 ATGAACAAGCGGCAGAGAATCGGCGGCACCGGCGTCGCCGTCGTCGACGTTTGGCGGCGGCAGTTAGGTCACTTGTCGGCCAGGGATTTCGCTCTCCGCCTCGCCGCTTCTGAGGATATTGTTCTCCGATTTGACATATGCAGAAGACTTGAAAAACACAAAGGTTCTGTAAATACTGTAAGCTTCAATGCAGATGGTGACATTCTGGTGTCAGGTTCCGATGACAGCAGGGTTGTTCTGTGGGATTGGGAAGCTGGAAATGTCAAGTTATCTTTTGATTCTGGTCATACTCACAACATCTTTCAAGCAAATATTATGCCCTTCTCAGATGATAGAAGCATTGTGACTTGTGCTGCTGATGGGCAGGTGAGACATGCTCAAATTTCAGAACAAGGAGAAGTGGAAACGAAGTTACTGACCAAGCATCAAGGACGGGCTCACAGGTTGGCAATTGAGCCTGGTAGTCCCTACACGTTTTATACATGTGGTGAAGATGGAATAGTACAGCATTTTGATTTGAGGACTGAGACTGCAACAGAACTATTCACATGCCAGCCAACTAAGGATAGAAGATATTACACGCCGTCCATCCATCTCAATGCAATTGCAATTGATCCCAGGAACCCAAATCTTTTTGCAGTTGGCGGGTCTGACGAGTATGCTCGAGTTTACGATCTTCGCAAGTATAAGTGGGATGGATCTACTGATTTTGGCCAACCCGCTGATTTCTTTTGTCCTCCACACTTGATTGGCAATAAGCAAGTTGGGATAACAGGCTTGGCCTTTTCTGAACAAAGCGAGCTGCTTGTGTCATACAACGATGAGCTCATCTATCTTTTTACACGAGACATGGGCTTAGGGCCTAACCCACTTCCTGGGTCTTCTGCTTCTACAAACACCAACAATGACACAGGTTCTGCAGCATCTGATGAGAAAATGAATGCACAAGTTTATAAGGGGCACAGGAATTGTAAGACAGTGAAGGGAGTCAACTTTTTTGGTCCTAATTGTGAGTATGTGGTGAGTGGGTCTGATTGTGGCCGGATTTTCATGTGGAAAAAGAAAGGTGGGCAGCTTGTTCGTGTCATGGAAGAAGGAGATAAGCTAGCTGTGAATTGCATTGAGTCTCATCCTCATACAATGGTTCTTGCAAGCAGTGGAATTGATAATGACATTAAAATATGGACACCAAATGCCCATGAAAAGGCCACTTTACCCAAAAATATTGAGCAGAAAACGCAAGATGGGGACCACTGGATGGCTTCTTCTTTGGATGTGCGGCTATCTTCACTTCCAAGGCACAGAAATGGTCACAACTCAACTATACATAGGGCATTTTTTGAGTTCATGTCCAGATTTGATGATGCCCTTGGTTATATACACTGGTGGACCATGGACGAGTCTGTTTGGAGGACTATCCCAAGCAAGTTGAAGACCAAAAAGGGCACCCCACAGCTCAGCATTAAATGCAGATCCTTTACCAAGATACTTTGA 1494 0.4518 MNKRQRIGGTGVAVVDVWRRQLGHLSARDFALRLAASEDIVLRFDICRRLEKHKGSVNTVSFNADGDILVSGSDDSRVVLWDWEAGNVKLSFDSGHTHNIFQANIMPFSDDRSIVTCAADGQVRHAQISEQGEVETKLLTKHQGRAHRLAIEPGSPYTFYTCGEDGIVQHFDLRTETATELFTCQPTKDRRYYTPSIHLNAIAIDPRNPNLFAVGGSDEYARVYDLRKYKWDGSTDFGQPADFFCPPHLIGNKQVGITGLAFSEQSELLVSYNDELIYLFTRDMGLGPNPLPGSSASTNTNNDTGSAASDEKMNAQVYKGHRNCKTVKGVNFFGPNCEYVVSGSDCGRIFMWKKKGGQLVRVMEEGDKLAVNCIESHPHTMVLASSGIDNDIKIWTPNAHEKATLPKNIEQKTQDGDHWMASSLDVRLSSLPRHRNGHNSTIHRAFFEFMSRFDDALGYIHWWTMDESVWRTIPSKLKTKKGTPQLSIKCRSFTKIL 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g1101 497 ProSiteProfiles Trp-Asp (WD) repeats profile. 50 91 IPR001680 GO:0005515
Sto2g1101 497 SUPERFAMILY WD40 repeat-like 42 395 IPR036322 GO:0005515
Sto2g1101 497 SMART WD40_4 132 172 IPR001680 GO:0005515
Sto2g1101 497 SMART WD40_4 356 396 IPR001680 GO:0005515
Sto2g1101 497 SMART WD40_4 311 353 IPR001680 GO:0005515
Sto2g1101 497 SMART WD40_4 43 82 IPR001680 GO:0005515
Sto2g1101 497 SMART WD40_4 177 225 IPR001680 GO:0005515
Sto2g1101 497 SMART WD40_4 242 281 IPR001680 GO:0005515
Sto2g1101 497 SMART WD40_4 85 127 IPR001680 GO:0005515
Sto2g1101 497 ProSiteProfiles Trp-Asp (WD) repeats profile. 364 395 IPR001680 GO:0005515
Sto2g1101 497 PANTHER WD REPEAT DOMAIN-CONTAINING FAMILY 9 444 IPR045151 -
Sto2g1101 497 Pfam WD domain, G-beta repeat 316 353 IPR001680 GO:0005515
Sto2g1101 497 Pfam WD domain, G-beta repeat 371 395 IPR001680 GO:0005515
Sto2g1101 497 Pfam WD domain, G-beta repeat 50 82 IPR001680 GO:0005515
Sto2g1101 497 Gene3D - 37 399 IPR015943 GO:0005515
Sto2g1101 497 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 50 82 - -
Sto2g1101 497 PANTHER WD40/YVTN REPEAT-LIKE-CONTAINING DOMAIN-CONTAINING PROTEIN-RELATED 9 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g1101 Sto-Chr2 9699976 9704489 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g1101 K11804 - gmx:100794236 645.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g1101 2 9699976 9704489 Sto2g1101 2 9699976 9704489 ECH